Pairwise Alignments

Query, 328 a.a., LysR family transcriptional regulator PA3398 from Pseudomonas fluorescens FW300-N2E2

Subject, 293 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  232 bits (592), Expect = 7e-66
 Identities = 126/289 (43%), Positives = 180/289 (62%), Gaps = 3/289 (1%)

Query: 21  MRFTLRQLQVFVAVAQQESVSRAAGQLNLSQSAASTSITELERQSSCQLFDRAGKRLSLN 80
           M  TLRQL+VF  V +  S ++A+  L LSQSA S ++T+LE Q   QLFDR GKRL +N
Sbjct: 1   MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQLGVQLFDRVGKRLVVN 60

Query: 81  ALGKQLLPQAVALLDQAKEIEDLLNGKSGFGSLAVGATLTIGNYLATLLIGGFMQRHPES 140
             G+ L P+A+ALL+QA EIE L    +G  ++ + A+ TIGNY+   +I  +   +P+ 
Sbjct: 61  EHGRLLYPRALALLEQAVEIEQLFREDNG--AIRIYASSTIGNYILPAVIARYRHDYPQL 118

Query: 141 QVKLHVQNTANIVHQVAHYEIDLGLIEGDCSHPDIEVQSWVEDELVVFCAPQHPLAKRGQ 200
            ++L V N+ +++  V  + +D+G IEG C   +I  + W+EDELVVF AP  PLA RG 
Sbjct: 119 PIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLEDELVVFAAPTSPLA-RGP 177

Query: 201 ATMEELTHEAWILREQGSGTRLTFDQAMRHHRSALNIRLELEHTEAIKRAVESGLGIGCI 260
            T+E+L    WILRE+GSGTR   D  +  H     + +EL ++EAIK AV  GLGI C+
Sbjct: 178 VTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMELGNSEAIKHAVRHGLGISCL 237

Query: 261 SRLALRDAFRRGSLVAVETPDMDLARQFYFIWHKQKYQTSAMREFLELC 309
           SR  + D  + G+L  V  P   L R  + I H+QK+ ++A+R FL+ C
Sbjct: 238 SRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLSNALRRFLDYC 286