Pairwise Alignments

Query, 307 a.a., ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) from Pseudomonas fluorescens FW300-N2E2

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Escherichia coli ECRC100

 Score =  403 bits (1036), Expect = e-117
 Identities = 202/302 (66%), Positives = 248/302 (82%)

Query: 6   HFFQQLVNGLTVGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIAIAGLAMMGL 65
           +F QQ+ NG+T+GSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYV+F+ IA L MMG+
Sbjct: 7   YFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGI 66

Query: 66  DSVPLLMTAAFIASIVVTSSYGYSIERIAYRPLRGSNRLIPLISAIGMSIFLQNTVLLSQ 125
           D+  LL+ A F+ +IV+ S+YG+SIER+AYRP+R S RLI LISAIGMSIFLQN V L++
Sbjct: 67  DTGWLLVAAGFVGAIVIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTE 126

Query: 126 DSKDKSIPNLIPGNFAIGPGGAHEVLISYMQIVVFVVTLVAMLGLTLFISRSRLGRACRA 185
            S+D ++P+L  G + +G        I+ MQ V+++VT +AML LT+FI  SR+GRACRA
Sbjct: 127 GSRDVALPSLFNGQWVVGHSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRA 186

Query: 186 CAEDIKMANLLGINTNNIIALTFVIGAALAAIAAVLLSMQYGVINPNAGFLVGLKAFTAA 245
           CAED+KMA+LLGINT+ +IALTFVIGAA+AA+A VLL   YGVINP  GF+ G+KAFTAA
Sbjct: 187 CAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAA 246

Query: 246 VLGGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVE 305
           VLGGIGSIPGAM+GGL+LG+AEA  +     +YKDVV+F LL+LVLL  PTGILGRPEVE
Sbjct: 247 VLGGIGSIPGAMIGGLILGIAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVE 306

Query: 306 KV 307
           KV
Sbjct: 307 KV 308