Pairwise Alignments

Query, 666 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

Subject, 670 a.a., conserved inner membrane protein (NCBI) from Escherichia coli BW25113

 Score =  159 bits (401), Expect = 5e-43
 Identities = 155/573 (27%), Positives = 254/573 (44%), Gaps = 43/573 (7%)

Query: 17  QFAIKTVLGAGLALWLALRWGLEQPSWALMTAIIVAQPLSGMVVQKGLARLVGTLVGTVM 76
           ++A++  +   LAL +A    L++P WA+ +A +V+ P  G V+ K L R+ G+L+G + 
Sbjct: 22  RYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGAIA 81

Query: 77  SVVFMGLFAQAPWLFLLALALWLGLCTACSTLLRSAWSYSFVLAGYTVAIIALPA--ISH 134
           +++  G     PW FLL+++ WLG CT       +  +Y+F LAGYT AIIA P   I+ 
Sbjct: 82  ALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAYAFQLAGYTAAIIAFPMVNITE 141

Query: 135 PLGVFDQAVARCTEISLGIVC----------ATAASALLWPLR-VERQLAGQALAAWQ-S 182
              ++D A AR  E+ +GI+C          ++ A+ALL  L+ +  +L   A   WQ  
Sbjct: 142 ASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALLTALKNMHARLLEHASLLWQPE 201

Query: 183 GMQAARATLAGDVQARKGLLEILGRIVAVDAQREHAWFEGSRGRQRARAISGLSQKLLML 242
              A RA   G          ++G+I+ ++  R  A++   R RQ+   ++ L  + L +
Sbjct: 202 TTDAIRAAHEG----------VIGQILTMNLLRIQAFWSHYRFRQQNARLNALLHQQLRM 251

Query: 243 LRLSRSVRR---QWKQLDPEEAEALQPWMNEV---QQALDADSATLQALRP-RVWDASHD 295
             +  S+RR    W        E L+  +  +   Q  +   +  +  LRP  V D  H 
Sbjct: 252 TSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDVYTVARIIAPLRPTNVADYRHV 311

Query: 296 PQISSAQSYCLARFALLLDTALAACAALTAVQEG-REAADPPRT--LAPHRDLSLAMVFG 352
                 + +C           L +   L  +Q G  +    PRT  LA H D + AM  G
Sbjct: 312 AFWQRLRYFC--------RLYLQSSQELHRLQSGVDDHTRLPRTSGLARHTDNAEAMWSG 363

Query: 353 ARSALAFLAVACFWLATAWPAASGALVLTCVVCSLFASRENGAQIGMSFLRGILLAVPTA 412
            R+    + +  + +A+ W A + AL L  + C L+++     +     +R ++L    +
Sbjct: 364 LRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLLSLFS 423

Query: 413 FVLGELLLPQWSS-FAMLCMAMGVPLFFGALGMAKPQIFATATSFCLHFVVLISPLNAMK 471
           FV+   L+ Q S  +  L     +      L +  P+  A      +     I+  N   
Sbjct: 424 FVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVTNPPV 483

Query: 472 YDVAAFFNNAQAMMIGVGAAVLAFNVLILRNPAWHSRRLLAATLHDLVRLTHRSLRGAES 531
           YD A F N+  A ++GV  A LAF +L   + A  SRR + A   D V    R    +ES
Sbjct: 484 YDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPTLSES 543

Query: 532 WFGGRMADRLLQLARHYPELPVQARSRWDDGLL 564
            F       + QL+     L  +   RW   LL
Sbjct: 544 EFESLTYHHVSQLSNSQDALARRWLLRWGVVLL 576