Pairwise Alignments

Query, 248 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 493 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  201 bits (512), Expect = 2e-56
 Identities = 104/205 (50%), Positives = 139/205 (67%)

Query: 40  VRDNILKTLYLNLLIGILVTLAVLAILYRLINSYQQRIDAQATLDSLTELPNRRGFDLLA 99
           V D I   LYLNL I  ++TL VLA+++ ++  +Q   +A ATLDSLT L NRR FDLLA
Sbjct: 288 VLDRIRHALYLNLAICTMITLVVLALVHAMVRRHQASTEALATLDSLTGLYNRRSFDLLA 347

Query: 100 VQALHEAQREPKPLTALLMELDDFKRLDTTHGHVATDQLLAGFARDLTQNLRHSDIVCRW 159
            QAL EA+R+  PL ALL++LD FK L+  HGH+A D++L  FA  L  +LR SDI+CRW
Sbjct: 348 AQALREARRDSSPLVALLIDLDHFKALNDNHGHLAGDEVLRQFANVLQGSLRQSDILCRW 407

Query: 160 STEAFVVLLKDIDGQTGLKIAEKIRQRIETQRYFCSGKQLLVTVSIGLTTLQDEDVLHTL 219
             E F+VLL++ +G+  +++AEKIR+R E   +    + L +T SIGL++LQ  D LH L
Sbjct: 408 GGEEFIVLLREAEGRQAIEVAEKIRRRTEQLTFSYDNQPLRLTTSIGLSSLQPGDTLHAL 467

Query: 220 LLRTDHALQRARQTGCNRICVEMPH 244
           L R D AL RA+Q G NR+C E  H
Sbjct: 468 LTRADRALYRAKQAGRNRVCSETRH 492



 Score = 44.3 bits (103), Expect = 5e-09
 Identities = 20/47 (42%), Positives = 32/47 (68%)

Query: 1  MSLRSPLYSQRKPLLAVVALLGTGFLIIALLGYYAAHASVRDNILKT 47
          M LRS L+SQR  ++ ++ LL  GFL  +LL Y ++ +++RD I+ T
Sbjct: 1  MPLRSALFSQRSLIVTLLVLLACGFLATSLLSYSSSRSAIRDGIINT 47