Pairwise Alignments

Query, 287 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  112 bits (280), Expect = 1e-29
 Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 12/282 (4%)

Query: 16  SLFVLLWSSGAIFSKLGLAHASPFAFLLIRFAIALSALVLLIPLLKFKLPKTGKPMLYAA 75
           ++FV LWS+G + +K  + +  P  FL +R+ +A   L  +        PK    +L A 
Sbjct: 9   AIFVFLWSTGWVTAKYAVYYTGPLTFLCLRYLLAGLLLWAICRFSGISWPKQRADVLRAI 68

Query: 76  TTGLVLLGAYQIFYLLALQMNVTPGVMATLMGVQPILTVV----LMERQRSWSRLFGLML 131
            +G+ L G Y      A+   V   +   + G+QP++T V    ++  + S  +  GL+L
Sbjct: 69  LSGVFLHGIYLGMIWWAIGQGVPAAIGGIIAGLQPLMTAVAARFMIGERISPLQRAGLLL 128

Query: 132 GLVGLVMVVYQGI---GLAGMS--LAGMLCGLLALVSMTAGSIMQKRITD--NPLGTLPV 184
           G  G+ + V   +   G  GMS  L  +   +L +VS+T G++ QK+     N +    +
Sbjct: 129 GFAGIAIAVLPKVMATGALGMSVPLYAVAVNVLGMVSVTYGTLYQKKYVHGGNIMAVATL 188

Query: 185 QYLAGLVLCAVF-VPFQPFHFEYNTGFIVPVLWMALVVSVLATLLLYRLIARGNLVNVTS 243
           QY+  L++   F +  +  H +++ G    + W    +S+ A  LL  LI RG +    S
Sbjct: 189 QYVGALLVTVPFALLLEDGHVDWSLGLAATLGWSVGAISIGAVALLLYLIRRGQVSRAAS 248

Query: 244 LFYLVPAVTAIMDYLVFGNRLALLSLLGMVLIIVGLVFVFRK 285
           L YLVP + A+   ++FG  L    + G VL + G+    RK
Sbjct: 249 LIYLVPPLAAVEAAVLFGETLTPAMIAGTVLAVTGVYLANRK 290