Pairwise Alignments

Query, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

Subject, 607 a.a., ATP-dependent DNA helicase RecQ from Erwinia tracheiphila SCR3

 Score =  533 bits (1372), Expect = e-155
 Identities = 276/598 (46%), Positives = 389/598 (65%), Gaps = 8/598 (1%)

Query: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSP 65
           ++VL++ FGY  FR  Q  II+    G D LV+MPTGGGKSLC+Q+PAL R+GL +VVSP
Sbjct: 14  EKVLQETFGYQQFRPGQQTIIQASLEGRDCLVVMPTGGGKSLCYQIPALARDGLTLVVSP 73

Query: 66  LIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRMLA 125
           LI+LM DQV  L   GV+AA LNST + E+Q+ +    R G +K+LY+APERL+    L 
Sbjct: 74  LISLMKDQVDQLLANGVSAACLNSTQTREEQQGVMACCRTGRIKLLYIAPERLMMDNFLD 133

Query: 126 FLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIV 185
            L    + + A+DEAHC+SQWGHDFR EY  LGQL +  P VP +ALTATAD+ TR +IV
Sbjct: 134 SLLHWNLVMLAVDEAHCISQWGHDFRPEYGALGQLRQRLPYVPVMALTATADETTRNDIV 193

Query: 186 ERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVDEVA 245
             L L D    +SSFDRPNI Y +V K +P +QLL ++ ++R   GI+YC SR KV++ A
Sbjct: 194 RLLQLHDPLIQISSFDRPNIRYTLVEKFKPTEQLLRYVQDQRGKCGIIYCNSRAKVEDTA 253

Query: 246 AFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDL 305
           A L  +G     YHAG+ N  RA  Q+ F  ++  I+VAT+AFGMGI+KPNVRFV H D+
Sbjct: 254 ARLQSRGLSVGAYHAGMDNVHRAQVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 313

Query: 306 PKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLDAML 365
           P+++E+YYQETGRAGRDGLPA+A M Y   D+  L++ L+   G    +++E HKL+AM 
Sbjct: 314 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMAWLRRCLEEKPGP--LQQIESHKLNAMG 371

Query: 366 SLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQRYGV 425
           +  E   CRR  LL YF E     CG+CD C+D    +D    A++ALS+I+R GQR+G+
Sbjct: 372 AFAEAQTCRRLVLLNYFGEGRQLACGNCDICLDPPRRYDGLVEAQKALSSIYRVGQRFGM 431

Query: 426 GHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGYGGL 485
           G++V++L G +++++R   H  L V+G+G+ ++   W S+ RQL+  GL   ++  +  L
Sbjct: 432 GYIVEILRGANSQRIRDMQHDKLPVYGIGRDQSHEHWISVLRQLIHLGLVTQNISMHSAL 491

Query: 486 RLSATCRPLLKGEVTLELR--RDLKPATAVKSSKSQASQLVRGEERDQWEALRALRRKLA 543
           +L+   RP+L+GE  L L   R +       S KS         +R  +  LR LR+ +A
Sbjct: 492 QLTEAARPVLRGETPLMLAVPRMVSARPRYNSQKSFGGNY----DRKLFARLRKLRKAIA 547

Query: 544 EEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVLGGEAEA 601
           +E  +PPYV+F D+TL+EM    P + +EM  ++GVG RKLER+G+ F+ V+    +A
Sbjct: 548 DEENIPPYVVFNDATLIEMAEQMPLTASEMLSINGVGQRKLERFGKPFMLVIREHVDA 605