Pairwise Alignments

Query, 520 a.a., Phenylalanine hydroxylase transcriptional activator PhhR from Pseudomonas fluorescens FW300-N2E2

Subject, 463 a.a., sigma-54-dependent Fis family transcriptional regulator from Pseudomonas sp. SVBP6

 Score =  218 bits (555), Expect = 4e-61
 Identities = 134/319 (42%), Positives = 184/319 (57%), Gaps = 19/319 (5%)

Query: 198 KQELRGFDSIFQSSKVMAAVVREARRMAPLDAPLLIEGETGTGKELLARACHLASPRGQS 257
           +Q    F     +S     V R ARR A  D+P+L+ GETGTGKELLA A H AS R   
Sbjct: 149 RQAKYSFAQFIGTSAASLEVKRRARRGASSDSPVLLLGETGTGKELLAHAIHAASARAHK 208

Query: 258 PLMALNCAGLPESMAETELFGYGPGAFEGARAEGKLGLLELTAGGTLFLDGVGEMSPRLQ 317
             +++N A +PE++ E E FG  PGAF GA  +G+ G L++  GGTLFLD +G+M   LQ
Sbjct: 209 AFVSINSAAIPETLLEAEFFGTAPGAFTGAERKGRSGKLQIAEGGTLFLDEIGDMPLPLQ 268

Query: 318 VKLLRFLQDGCFRRVGSDEEVYLDVRVICATQVDLSELCARGEFRQDLYHRLNVLSLHIP 377
            KLLR LQ+  +  VGS++ ++ DVR+I AT  DL    ARGEFR DLY+RLNVL + +P
Sbjct: 269 SKLLRVLQEKEYEPVGSNQMIHSDVRIIAATSTDLQAAMARGEFRADLYYRLNVLPIQVP 328

Query: 378 PLRECLDGLAPLVEHFLDQASRQIGCPLPKLAPAAMERLSRYHWPGNVRQLENVLFQAVS 437
           PLRE LD L  L E  L++   Q      +L   A   L+R+ WPGN+R+L NVL +A  
Sbjct: 329 PLRERLDDLPALSEAILEELGSQ-----HELEDPAQALLARHAWPGNIRELRNVLERA-- 381

Query: 438 LCDGGTVKAEHIRLPDYGVRQPLGDFS-LEGGLDEIVGRFEKAVLERLYSEHPSSRQLG- 495
                T+ A+  RL    V+  LGD + L+  L ++  +   A  ER   E+  +R  G 
Sbjct: 382 -----TLLADQPRLSVGDVQAALGDLAPLQVQLPQLSYKQACADFERQLLENTLARCAGN 436

Query: 496 -----KRLGVSHTTIANKL 509
                ++LG+  +T+  KL
Sbjct: 437 VPEAARQLGLGRSTLYKKL 455