Pairwise Alignments

Query, 245 a.a., Flagellar basal-body rod protein FlgF from Pseudomonas fluorescens FW300-N2E2

Subject, 251 a.a., flagellar component of cell-proximal portion of basal-body rod (NCBI) from Escherichia coli BW25113

 Score =  166 bits (421), Expect = 3e-46
 Identities = 97/240 (40%), Positives = 131/240 (54%), Gaps = 7/240 (2%)

Query: 1   VDKYLYVAMTGASQNALAQRAHANNLANISTNGFQKDLEQARSMPVFGDSFPARAFAMSE 60
           +D  +Y AM  ASQ    Q   A+NLAN ST GF+  L   R++PV G S P R    + 
Sbjct: 1   MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAVPVEGLSLPTRTLVTAS 60

Query: 61  RPATDFTPGALVETGRDLDVAVSGPGWMAVQNPDGGESYVRTGSLNVDALGVLRAGNGMP 120
            P  D TPG +  T R LDVA+   GW+AVQ  DG E Y R GS+ VD  G L    G P
Sbjct: 61  TPGADMTPGKMDYTSRPLDVALQQDGWLAVQTADGSEGYTRNGSIQVDPTGQLTI-QGHP 119

Query: 121 VMGNGGPIAVPPEQKIEIGQDGTISIRAMGEGPRVMAEVDRIKLVNPDLKNMTKGLDGSI 180
           V+G  GPIAVP   +I I  DGTIS    G+    +A V R+KLV      + +G DG  
Sbjct: 120 VIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGRLKLVKATGSEVQRGDDGIF 179

Query: 181 R------TKDGQPAPIDANVQLVSGFQEASNVNAVDEMTSVLALAKQFELHVKMMNTAKE 234
           R         G     D  ++++SG  E SNVNAV  M+ ++A A++FE+ +K++++  +
Sbjct: 180 RLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMSDMIASARRFEMQMKVISSVDD 239