Pairwise Alignments

Query, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2

Subject, 519 a.a., Flagellin protein FlaA from Pseudomonas sp. S08-1

 Score =  203 bits (516), Expect = 7e-57
 Identities = 125/284 (44%), Positives = 166/284 (58%), Gaps = 33/284 (11%)

Query: 1   MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
           MALTVNTNV SLN Q+NLN +S  L TS+ RLS+G +INSAKDDAAGLQI+ R+TSQI G
Sbjct: 1   MALTVNTNVASLNTQRNLNTSSKGLDTSLQRLSTGFRINSAKDDAAGLQISNRLTSQING 60

Query: 61  QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
             VA +NANDGIS++QTAEGALQ+ST ILQRMR+LA+Q+ N SNG ++R AL  E +Q+ 
Sbjct: 61  LNVATRNANDGISLSQTAEGALQQSTGILQRMRDLALQSANGSNGASERAALQGEVSQLQ 120

Query: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITL------------------- 161
            EL RIA++T+  G+ ++DGS G+ TFQVG+N   T  +++                   
Sbjct: 121 QELNRIADTTSFGGRKILDGSFGSQTFQVGANAFETINVSIGAAEASRIGVNRYNTASST 180

Query: 162 -TLDSGFDAATLSVDSAAIAITGSDSTTAEASTSAAIVAIDAALATIN----SSRADLGA 216
            T  S   AAT   D AA   TG     +   TSA  +      +TI+    +S  D+ A
Sbjct: 181 GTGTSAGYAATNVADYAAATATGLGYQQSGTGTSALSITGKLGSSTIDFTNGASARDVAA 240

Query: 217 AQNRLTS---------TISNLQNVNENAAAALGRVQDTDFAAET 251
           A N  +          T+++L   +       G V  T + A T
Sbjct: 241 AVNAKSDVTGVTANARTVASLDTFSSLTGTQTGTVSFTLYGANT 284



 Score =  116 bits (290), Expect = 1e-30
 Identities = 90/258 (34%), Positives = 130/258 (50%), Gaps = 28/258 (10%)

Query: 30  TRLSSGLKINSAKDDAAGLQIATRMTSQIRGQT-VAIKNANDGISIAQTAEGALQESTNI 88
           T   +G+ I++   DA          ++  G T ++ K  +DG  +  T+E         
Sbjct: 284 TGSGNGVSISANITDATDFSALADAINKETGTTGISAKLNSDGTGVEMTSE--------- 334

Query: 89  LQRMRELAVQARNDSNGTADREALNKEFAQMSDELTRIAESTNLNGKNLIDGSAGTMTFQ 148
             +   + +   + + GTA   AL       +D L             + DG+AG    Q
Sbjct: 335 --KGDAIVIDDLSANGGTA---ALTSYVFDGNDGLDTDDSDVVGAAATIADGAAGRADGQ 389

Query: 149 VGSNT----GATNQITLTLDSGFDAATLSVDSAAIAITGSDSTTAEASTSAAIVAIDAAL 204
           V   +      TN +T     GF        S   ++   D +TA  + +A  + I+ A+
Sbjct: 390 VRLESPDAFNVTNAVTEFGGGGF--------SELESVAEIDVSTAVGAQNALGI-INGAI 440

Query: 205 ATINSSRADLGAAQNRLTSTISNLQNVNENAAAALGRVQDTDFAAETAQLTKQQTLQQAS 264
           + I+S RA LGA QNR  +TISNLQN+ ENA+AA  R++DTDFAAET++LTK Q LQQA 
Sbjct: 441 SNIDSQRAQLGAVQNRFENTISNLQNIAENASAARSRIRDTDFAAETSELTKNQILQQAG 500

Query: 265 TSVLAQANQLPSAVLKLL 282
           T++LAQANQLP AVL LL
Sbjct: 501 TAILAQANQLPQAVLSLL 518