Pairwise Alignments

Query, 283 a.a., Flagellin protein FlaA from Pseudomonas fluorescens FW300-N2E2

Subject, 498 a.a., flagellin (NCBI) from Escherichia coli BW25113

 Score =  159 bits (402), Expect = 1e-43
 Identities = 105/268 (39%), Positives = 144/268 (53%), Gaps = 6/268 (2%)

Query: 1   MALTVNTNVTSLNVQKNLNRASDALSTSMTRLSSGLKINSAKDDAAGLQIATRMTSQIRG 60
           MA  +NTN  SL  Q N+N+   ALS+S+ RLSSGL+INSAKDDAAG  IA R TS I+G
Sbjct: 1   MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDDAAGQAIANRFTSNIKG 60

Query: 61  QTVAIKNANDGISIAQTAEGALQESTNILQRMRELAVQARNDSNGTADREALNKEFAQMS 120
            T A +NANDGIS+AQT EGAL E  N LQR+REL VQA   +N  +D  ++  E     
Sbjct: 61  LTQAARNANDGISVAQTTEGALSEINNNLQRVRELTVQATTGTNSESDLSSIQDEIKSRL 120

Query: 121 DELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQITLTLDSGFDAATLSVDSAAIA 180
           DE+ R++  T  NG N++    G+M  QVG+N   T  IT+ L    DA TL +D  ++ 
Sbjct: 121 DEIDRVSGQTQFNGVNVL-AKNGSMKIQVGANDNQT--ITIDLKQ-IDAKTLGLDGFSVK 176

Query: 181 ITGSDSTTAEASTSAAIVAIDAALA--TINSSRADLGAAQNRLTSTISNLQNVNENAAAA 238
              + +T+A  +   A    +  L   T+++  A      N  +       N N+  A  
Sbjct: 177 NNDTVTTSAPVTAFGATTTNNIKLTGITLSTEAATDTGGTNPASIEGVYTDNGNDYYAKI 236

Query: 239 LGRVQDTDFAAETAQLTKQQTLQQASTS 266
            G   D  + A T       T+   +T+
Sbjct: 237 TGGDNDGKYYAVTVANDGTVTMATGATA 264



 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 60/186 (32%), Positives = 102/186 (54%), Gaps = 4/186 (2%)

Query: 101 NDSNGTADREALNKEFAQMSDELTRIAESTNLNGKNLIDGSAGTMTFQVGSNTGATNQIT 160
           ND++  A ++     +A   +E T       +   +    ++     ++G + G T  + 
Sbjct: 313 NDTDTYALKDTNGNLYAADVNETTGAVSVKTITYTDSSGAASSPTAVKLGGDDGKTEVVD 372

Query: 161 LTLDSGFDAATLSVDSAAIAIT-GSDSTTAEAS--TSAAIVAIDAALATINSSRADLGAA 217
           +     +D+A L+  +    +T G ++ TA A+  T+  + A+D A+A+++  R+ LGA 
Sbjct: 373 ID-GKTYDSADLNGGNLQTGLTAGGEALTAVANGKTTDPLKALDDAIASVDKFRSSLGAV 431

Query: 218 QNRLTSTISNLQNVNENAAAALGRVQDTDFAAETAQLTKQQTLQQASTSVLAQANQLPSA 277
           QNRL S ++NL N   N + A  R+QD D+A E + ++K Q +QQA  SVLA+ANQ+P  
Sbjct: 432 QNRLDSAVTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQ 491

Query: 278 VLKLLQ 283
           VL LLQ
Sbjct: 492 VLSLLQ 497