Pairwise Alignments

Query, 594 a.a., Flagellar M-ring protein FliF from Pseudomonas fluorescens FW300-N2E2

Subject, 552 a.a., flagellar M-ring protein (NCBI) from Escherichia coli BW25113

 Score =  314 bits (804), Expect = 7e-90
 Identities = 209/582 (35%), Positives = 314/582 (53%), Gaps = 58/582 (9%)

Query: 28  LENLSEMTMLRQVGLLVGLAASVAIGFAVVLWSQQPDYRPLYGSLAGMDAKQVMETLASA 87
           LE L+ +    ++ L+V  +A+VA+  A++LW++ PDYR L+ +L+  D   ++  L   
Sbjct: 11  LEWLNRLRANPKIPLIVAGSAAVAVMVALILWAKAPDYRTLFSNLSDQDGGAIVSQLTQM 70

Query: 88  DIPYTVEPNSGALLVKADDVARARLKLAAAGVTPTDGNIGFEILDKDQGLGTSQFMEATR 147
           +IPY     SGA+ V AD V   RL+LA  G+ P  G +GFE+LD+++  G SQF E   
Sbjct: 71  NIPYRFSEASGAIEVPADKVHELRLRLAQQGL-PKGGAVGFELLDQEK-FGISQFSEQVN 128

Query: 148 YRRGLEGELARTISSLNNVKGARVHLAIPKSSVFVRDERKPSASVLVELYSGRSLEPGQV 207
           Y+R LEGEL+RTI ++  VKGARVHLA+PK S+FVR+++ PSASV V L  GR+L+ GQ+
Sbjct: 129 YQRALEGELSRTIETIGPVKGARVHLAMPKPSLFVREQKSPSASVTVNLLPGRALDEGQI 188

Query: 208 VAIVNLVATSVPELSKSQITVVDQKGNLLSDQAENSELTMAGKQFDYSRRMEGMLTQRVH 267
            AIV+LV+++V  L    +T+VDQ G+LL+ Q+  S   +   Q  Y+  +EG + +R+ 
Sbjct: 189 SAIVHLVSSAVAGLPPGNVTLVDQGGHLLT-QSNTSGRDLNDAQLKYASDVEGRIQRRIE 247

Query: 268 NILQPILGNDRYKAEVSADVDFSAVESTSEQFNPD----QPALRSEQSVNEQRTASNGPQ 323
            IL PI+GN    A+V+A +DF++ E T EQ+ P+      ALRS Q    +++ S  P 
Sbjct: 248 AILSPIVGNGNIHAQVTAQLDFASKEQTEEQYRPNGDESHAALRSRQLNESEQSGSGYPG 307

Query: 324 GVPGALSNQPPSPASAPQTTGGATAAAGMVQPGQPLIDANGQQIMDPATGQPMLAPYPAD 383
           GVPGALSNQP    +AP +T              P  + N +Q     T        P  
Sbjct: 308 GVPGALSNQPAPANNAPIST--------------PPANQNNRQQQASTTSN----SGPRS 349

Query: 384 KRQQSTKNFELDRSISHTKQQQGRLNRLSVAVVVDDQVKVNAANGETSRAPWSADELARF 443
            ++  T N+E+DR+I HTK   G + RLSVAVVV+ +   +         P S +++ + 
Sbjct: 350 TQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDG-----KPLPLSNEQMKQI 404

Query: 444 TRLVQDAVGFDASRGDSVSVINVPFSLERGEVVADIPFYSQPWFWDVV----KQVLGVLF 499
             L ++A+GF   RGDS++V+N PF+    E   ++PF+ Q  F D +    + +L +L 
Sbjct: 405 EDLTREAMGFSEKRGDSLNVVNSPFN-SSDESGGELPFWQQQAFIDQLLAAGRWLLVLLV 463

Query: 500 ILVLVFGVLRPVLNNITGGGKNKQLAAFG--------DVELGGMGGLDGELANDRVSLGG 551
             +L    +RP L       K  Q  A          +V L     L    AN R+    
Sbjct: 464 AWLLWRKAVRPQLTRRAEAMKAVQQQAQAREEVEDAVEVRLSKDEQLQQRRANQRL---- 519

Query: 552 PQSILLPSPSEGYDAQLNAIKSLVAEDPGRVAQVVKEWINAD 593
                      G +     I+ +   DP  VA V+++WIN D
Sbjct: 520 -----------GAEVMSQRIREMSDNDPRVVALVIRQWINND 550