Pairwise Alignments

Query, 394 a.a., 3-ketoacyl-CoA thiolase (EC 2.3.1.16) from Pseudomonas fluorescens FW300-N2E2

Subject, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  311 bits (797), Expect = 2e-89
 Identities = 178/395 (45%), Positives = 243/395 (61%), Gaps = 2/395 (0%)

Query: 1   MREVVIVDSVRTGLAKSFRGKFNMTRPDDMAAHCVDALLAR-NDINPASVEDCIVGAGSN 59
           +++  IV + RT + KS RG F   RPDD+ A  + A LA    ++P ++ED I G    
Sbjct: 4   VQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIP 63

Query: 60  EGAQGYNIGRNVAVLSRLGTGTAGMTLNRFCSSGLQAIAIAANQIASGCSDIIVAGGVES 119
           E  QG N+ R  AVL+ L T   G+T+NRFC+SGL A+ +AA++I  G +D+++A GVES
Sbjct: 64  ESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVES 123

Query: 120 ISLTMKSVNTDHLINPLL-KEQVPGIYFPMGQTAEIVARRYQVSREEQDRYALQSQQRTA 178
           +S+     N+  L   +  +E   GI + MG TAE VA++++VSRE QD +AL S Q+  
Sbjct: 124 MSMVPMMGNSPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQKAL 183

Query: 179 KAQAAGLFDDEIIPMAIKYRVEDKNTGAVQILDGVVDRDDCNRPDTTYESLAGLKPVFAE 238
            AQ AG F DEI P+ +  R  +  TG        V+ D+  RPDT+ E LA L+ VFA 
Sbjct: 184 AAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDTSLEGLAKLRTVFAA 243

Query: 239 DGSVTAGNSSQLSDGASMTLVISLEKALALGLKPKAFFRGFTVAGCEPDEMGIGPVFSVP 298
            G+VTAGNSSQ SDGA   ++ S +     GL P A F  F   G  P  MGIGP+ ++P
Sbjct: 244 RGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGIGPIEAIP 303

Query: 299 KLLKAKGLQIADIDLWELNEAFASQCLYSRNRLEIDPGKYNVNGGSISIGHPFGMTGSRQ 358
             L+  GL+  DID +ELNEAFA+Q L   N L +DP K N  GG+I++GHP G TG+ +
Sbjct: 304 AALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGLDPSKVNPMGGAIALGHPLGATGAIR 363

Query: 359 VGHLVRELQRRNLRYGVVTMCVGGGMGATGLFEMV 393
              +V  L+R NL+YG+VTMCVG G GA G+FE V
Sbjct: 364 SATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV 398