Pairwise Alignments

Query, 111 a.a., Competence protein ComEA helix-hairpin-helix region precursor from Pseudomonas fluorescens FW300-N2E2

Subject, 123 a.a., putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein from Escherichia coli BL21

 Score = 70.5 bits (171), Expect = 7e-18
 Identities = 42/107 (39%), Positives = 64/107 (59%), Gaps = 12/107 (11%)

Query: 8   SLVFAFLTSASIAAIAAPVVKPEVVAT----PQAVEQPA------KTQSTKVDLNGADAA 57
           SL  A ++ +++AA  AP  KP  V T    P A  + A        + T+V +N A A 
Sbjct: 13  SLACAGMSHSALAA--APAAKPTTVETKAEAPAAQSKAAVLAKASDEEGTRVSINNASAE 70

Query: 58  TLQRELSGIGKGKAEAIVAYRENNGPFSSVEELLEVKGIGKAILDRN 104
            L R ++G+G  KA+AIV+YRE  GPF +VE+L +V G+G ++++RN
Sbjct: 71  ELARAMNGVGLKKAQAIVSYREEYGPFKTVEDLKQVPGMGNSLVERN 117