Pairwise Alignments

Query, 323 a.a., ErfK/YbiS/YcfS/YnhG family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 311 a.a., L,D-transpeptidase from Escherichia coli ECRC99

 Score =  192 bits (487), Expect = 1e-53
 Identities = 116/300 (38%), Positives = 164/300 (54%), Gaps = 17/300 (5%)

Query: 16  ALCMAGHVA-ALELPLPPPGEDIVGQVQVIKAKYEDT--FADLGTTYDLGYSEMVAANPG 72
           AL  A H + A+  PLPP G  +VGQ   +     +T         Y  G S M+ ANPG
Sbjct: 12  ALLFASHTSLAVTYPLPPEGSRLVGQSLTVTVPDHNTQPLETFAAQYGQGLSNMLEANPG 71

Query: 73  VDPWLPGAGTEIVLPTRFILPPGPREGIVINLAEYRLYYFPKGRNVVYTFPLGIGREGWG 132
            D +LP +G+++ +P + ILP   R+GIV+N+AE RLYY+P   N V  FP+GIG+ G  
Sbjct: 72  ADVFLPKSGSQLTIPQQLILPVTVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRE 131

Query: 133 SPIAH-TSIIAKTPNPTWTPPASIKAEHAADGDPLPNVVPAGPDNPLGPFKFTLGTPGYL 191
           +P    T++  K   PTWTP  + + E+A  G+ LP  VPAGPDNP+G +   +G   Y 
Sbjct: 132 TPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRL-YA 190

Query: 192 IHGSNKKFGIGMRTSHGCFRMFNNNVLEMAGMVPVGTSVRIINDPYKLGLS-GGKVYLEA 250
           IHG+N  FGIG+R S GC R+ N+++  +   VPVGT V+II+ P K      G  +LE 
Sbjct: 191 IHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSKWLEV 250

Query: 251 HTPLDDKGNPSVVDKH-----TSVINAMLKREDITSNLRMNWDVVRDVVAAEDGMPVEIA 305
           H PL         D+      T  + A +  +++  N R N  + R       GMPV+I+
Sbjct: 251 HEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVN-RANAALQR-----RSGMPVQIS 304