Pairwise Alignments

Query, 402 a.a., Ammonium transporter from Pseudomonas fluorescens FW300-N2E2

Subject, 408 a.a., Ammonia channel from Azospirillum sp. SherDot2

 Score =  540 bits (1390), Expect = e-158
 Identities = 266/403 (66%), Positives = 312/403 (77%), Gaps = 8/403 (1%)

Query: 8   VDGLVHSSNTLFILLGAVMVLAMHAGFAFLEVGTVRQKNQVNALSKILSDFAVSTLAYFF 67
           +D      + LF+L+GAVMVLAMH GFA LEVGTVR+KNQVNAL KILSDFA+ST+AYFF
Sbjct: 1   MDAAKTGGDVLFVLMGAVMVLAMHCGFALLEVGTVRRKNQVNALVKILSDFAMSTIAYFF 60

Query: 68  IGYWIAYGVTFLQPAAVLS-------ADHGYSLVKFFFLLTFAAAIPAIISGGIAERARF 120
           +GY +AYG+ F   A  L        A +GY LVKFFFL TFAAA+PAI+SGGIAERARF
Sbjct: 61  VGYAVAYGIDFFADAHTLVGKGSGGFAAYGYDLVKFFFLATFAAAVPAIVSGGIAERARF 120

Query: 121 APQLCATVLIVAFVYPFFEGMIWNGNFGLQAWLQARFGASFHDFAGSVVVHAMGGWLALA 180
            PQ  AT+ ++A  YP  EG +W   FGLQ W+ A FG  FHDFAGSVVVHA GGW+AL 
Sbjct: 121 WPQAGATLALIALFYPLLEGTVWGTRFGLQGWMAATFGQPFHDFAGSVVVHAFGGWVALG 180

Query: 181 AVLLLGPRNGRYR-DGRLVAFAPSSIPFLALGSWILIVGWFGFNVMSAQTLPGVSGLVAV 239
           AVL LG R GRYR +G L+A  PS+IPFLALG+W+L VGWFGFNVMSAQ L GV+GLVA+
Sbjct: 181 AVLNLGNRRGRYRPNGSLIAIPPSNIPFLALGAWVLCVGWFGFNVMSAQVLDGVTGLVAL 240

Query: 240 NSLMAMVGGTVAALIVGRNDPGFLHNGPLAGLVAVCAGSDLMHPVGALVTGAIAGALFVW 299
           NSLMAMVGG V +L++ R DPGF+HNG LAGLVAVCAGSD+MHP+GALVTG IAG LFVW
Sbjct: 241 NSLMAMVGGIVTSLVISRTDPGFVHNGALAGLVAVCAGSDVMHPLGALVTGGIAGLLFVW 300

Query: 300 CFTAAQGKWKIDDVLGVWPLHGLCGVWGGIACGVFGQSALGGLGGVSLVSQLIGTALGVV 359
            F   Q  WKIDDVLGVWPLHGLCG+ GG+  GVFGQ ALGGLGGVS++SQ++GT  G  
Sbjct: 301 AFNKCQIDWKIDDVLGVWPLHGLCGLTGGLLAGVFGQEALGGLGGVSILSQIVGTLGGAG 360

Query: 360 VALAGGFAVYGMVRVVLGLRLTQEEEYYGADLSIHKIGAVSQD 402
              A G AVYG++RV +G+RL  E+EY GADLS+H I A  ++
Sbjct: 361 FGFASGLAVYGLLRVTVGIRLDPEQEYKGADLSLHHITAYPEE 403