Pairwise Alignments

Query, 296 a.a., Similar to ribosomal large subunit pseudouridine synthase A from Pseudomonas fluorescens FW300-N2E2

Subject, 295 a.a., pseudouridine synthase from Pseudomonas sp. SVBP6

 Score =  453 bits (1165), Expect = e-132
 Identities = 219/296 (73%), Positives = 244/296 (82%), Gaps = 1/296 (0%)

Query: 1   MSGSSFSAAHHQASTLYLPPGSWQTVLECLCEHFSAISREQWLDRIARGRVLDGEGKAIQ 60
           M+   F  A HQAST+ LPPG+W TVL+CL EHF AI REQWLDRIARGRVLD +G  I 
Sbjct: 1   MATPPFDPAQHQASTVCLPPGNWATVLDCLSEHFKAIGREQWLDRIARGRVLDAQGAPIS 60

Query: 61  VDLPYREGLRIHYFREVPDEKPIPVVESILYADEHLVVADKPHFLPVTPAGEYVEQTLLR 120
             L YR GLRIHYFREVP+EKPIPV E+IL+ DEHLVVADKPHFLPVTP GEYVEQTLLR
Sbjct: 61  ASLVYRPGLRIHYFREVPNEKPIPVEEAILHIDEHLVVADKPHFLPVTPTGEYVEQTLLR 120

Query: 121 RLIRRLDNPHLVPLHRIDRHTAGLVLFSANPHTRSVYQSLFPTRQIEKRYQAIARALPGL 180
           RLIRRLDNP+LVPLHRIDRHTAGLVLFSANP +RS YQSLFP RQI+KRYQAIARALP  
Sbjct: 121 RLIRRLDNPNLVPLHRIDRHTAGLVLFSANPQSRSAYQSLFPNRQIDKRYQAIARALPER 180

Query: 181 TFPRVHRSRMIDGEPFFRMQEGPGEPNTETAIEVLERNGELWRYGLYPVTGKKHQLRVHM 240
            FP VH+SR+++GEPFFRMQE  G  N+ET  +VLE+NGELWRYGL PVTGK HQLRVHM
Sbjct: 181 AFPLVHKSRLVNGEPFFRMQEVDGLSNSETLADVLEKNGELWRYGLSPVTGKTHQLRVHM 240

Query: 241 NALGAGICNDPFYPDVLRDAEDDYANPLKLLAQGLRFIDPITGQERVFQSEIILQW 296
            ALGA ICNDPFYPD+++   DDY+ PLKLLA  LRF DP+ G ER F+S + L W
Sbjct: 241 TALGASICNDPFYPDIVQ-GPDDYSRPLKLLAHSLRFKDPLNGAERYFESRLTLDW 295