Pairwise Alignments

Query, 219 a.a., Transcriptional regulator, GntR family from Pseudomonas fluorescens FW300-N2E2

Subject, 221 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 62.8 bits (151), Expect = 5e-15
 Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 2/202 (0%)

Query: 8   SLAEQIAHHLAERIIRGEMKPGERIQEQKVTLALNVSRGSVREALLILERRHLIAILPRR 67
           SL  Q+ + L  ++  G +KPG R+  + +   L +S   VREALL L   + +++ P +
Sbjct: 11  SLTLQVENDLKHQLSIGALKPGARLITKNLAEQLGMSITPVREALLRLVSVNALSVAPAQ 70

Query: 68  GAHVTELTEHKVRSLCTLMSELYILLGYAVAHGWKEQADMAPFVAIQQRLNDAYARQDIR 127
              V E+ + ++  +  +  EL  L+  A+A       D+A    + ++L  A  + D+ 
Sbjct: 71  AFTVPEVGKRQLDEINRIRYELE-LMAVALAVENLTPQDLAELQELLEKLQQAQEKGDME 129

Query: 128 TFVDESFSVMRAAYPFANNPYLQETVENLQPAMSRA-YFLALDQRKAEMSEFLDLFQRLL 186
             ++ +     A Y  +N P L E +E L   M    ++L      AE+ E ++ +  LL
Sbjct: 130 QIINVNRLFRLAIYHRSNMPILCEMIEQLWVRMGPGLHYLYEAINPAELREHIENYHLLL 189

Query: 187 AAVLARDLPQIRLVLTAYAQRS 208
           AA+ A+D    R  L    Q++
Sbjct: 190 AALKAKDKEGCRHCLAEIMQQN 211