Pairwise Alignments

Query, 785 a.a., DNA ligase (EC 6.5.1.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 671 a.a., DNA ligase (EC 6.5.1.2) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  639 bits (1647), Expect = 0.0
 Identities = 331/601 (55%), Positives = 418/601 (69%), Gaps = 21/601 (3%)

Query: 1   MTAVETRIQQLRTELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEEQHPELVTSDSPTQ 60
           M  +E ++ +LRT L  H Y YHV+D P IPDAEYDRL  EL+ LE Q P+L+T DSPTQ
Sbjct: 1   MEPIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRPDLITPDSPTQ 60

Query: 61  RVGSMALSAFSQVRHEIPMLSLGNAFDEATMREFDRRVTEGLDLPMGDLLGGGAAVEYSC 120
           RVG+  L+AF+Q+RHE+PMLSL N FDE +   F++RV         D L     V + C
Sbjct: 61  RVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQ--------DRLKSTENVIWCC 112

Query: 121 EPKLDGLAVSLLYQDGLLVRGATRGDGTTGEDISVNVRTVRNIPLKLQGSGWPPLLEVRG 180
           E KLDGLAVS+LY++G+LV  ATRGDGTTGEDI+ NVRT+R IPLKL G   P  LEVRG
Sbjct: 113 ELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGDNIPARLEVRG 172

Query: 181 EVYMSKAGFERLNATQLEAGGKTFANPRNAAAGSLRQLDSKITANRPLEFCCYGIGQVTT 240
           EV++ +AGFE++N      GGK FANPRNAAAGSLRQLD +ITA RPL F CYG+G +  
Sbjct: 173 EVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEG 232

Query: 241 -DIADTHIGNLKQLKAWGLPISRELKLAHGIDECLDYYRDIGERRNALPYEIDGVVFKVN 299
            ++ DTH+G L Q KAWGLP+S  + L       LD+Y ++ + R  L ++IDGVV KVN
Sbjct: 233 GELPDTHLGRLLQFKAWGLPVSDRVTLCDSPQAVLDFYHNVEKDRPTLGFDIDGVVIKVN 292

Query: 300 SIASQRELGFRAREPRWAIAHKFPASEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVT 359
           S+A Q  LGF AR PRWA+A KFPA E++T + DVEFQVGRTGA+TPVARL+PV+VAGV 
Sbjct: 293 SLALQELLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVL 352

Query: 360 VANATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVITERRPEHARPVAIPQQCPVCG 419
           V+NATLHN DE+ RLGL IGD V+IRRAGDVIPQVV V+   RPE  RP+  P  CPVCG
Sbjct: 353 VSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETRPIVFPTHCPVCG 412

Query: 420 SHVERTQLIKRSKGRETISEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIEGLGEKSVE 479
           S VER            +   AV RC G L CGAQ K+++ HFVSRRAMD++G+G+K ++
Sbjct: 413 SDVER------------VEGEAVTRCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIID 460

Query: 480 QLVDEGLVGSPADLYALTFEQVVDLEGFAELSSKNLLAAIVDSKKPSLARFIYALGIPDV 539
           QLV+   V +PADL+ LT  ++  L+     S++N++ A+  SK  + ARF+YALGI +V
Sbjct: 461 QLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEKSKTTTFARFLYALGIREV 520

Query: 540 GEETAKVLARSLGSLERVQAALPQVLTYLPDVGLEVAHEIHSFFEDPHNRQVIKDLLRHG 599
           GE TA  LA   G+LE +QAA    L  +PDVG+ VA  + +FF +  NR VI  LL  G
Sbjct: 521 GEATAAGLAAYFGTLEALQAATIDELQKVPDVGIVVATHVFNFFAEESNRDVIGQLLAEG 580

Query: 600 L 600
           +
Sbjct: 581 V 581



 Score =  111 bits (278), Expect = 1e-28
 Identities = 82/174 (47%), Positives = 99/174 (56%), Gaps = 11/174 (6%)

Query: 611 EFSASTTLGGFLDKLDIPSVGPGGAQKLADKFGSLEAVMNADWLDMRQALPEKQ---ANA 667
           E S +TT   FL  L I  VG   A  LA  FG+LEA+  A  +D  Q +P+     A  
Sbjct: 501 EKSKTTTFARFLYALGIREVGEATAAGLAAYFGTLEALQAAT-IDELQKVPDVGIVVATH 559

Query: 668 VREFFANASNRQQAEAAERQLRDFGMHWQSEKKV-VEGL--PEAGHTWVLTGSLELMSRD 724
           V  FFA  SNR        QL   G+HW +   + V+ +  P AG T VLTGSL  MSRD
Sbjct: 560 VFNFFAEESNRDVIG----QLLAEGVHWPAPVVINVQEIDSPFAGKTVVLTGSLSQMSRD 615

Query: 725 VAKDKLESLGAKVAGSVSVKTHCVVAGPGAGSKLTKANELGLKVLDEEAFVAFL 778
            AK +L +LGAKVAGSVS KT  V+AG  AGSKL KA ELG+ V+DE   +  L
Sbjct: 616 DAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGITVIDEAEMIRLL 669