Pairwise Alignments

Query, 444 a.a., Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps from Pseudomonas fluorescens FW300-N2E2

Subject, 464 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  741 bits (1913), Expect = 0.0
 Identities = 366/442 (82%), Positives = 401/442 (90%)

Query: 1   LLALALPIMVAQLATTAMGFVDAVMAGRVGPRDLAAVALGNSIWVPVFLLMTGTLLATTP 60
           LL LALPIM+ QLATTAM FVDAVMAGRV P+DLAAV LGNSIW+PV+LLMTGTLLATTP
Sbjct: 21  LLTLALPIMIGQLATTAMSFVDAVMAGRVSPQDLAAVGLGNSIWIPVYLLMTGTLLATTP 80

Query: 61  KVAQRFGAGTFAEIGPLVRQALWLALVVGLIASLALFSAEPILHIMNVDPELIGPCMEYL 120
           KVAQR+GAG F+EIGPLVRQ+LWLA+VVG+ ASL L  AEPILH+MNV+P+LI P M YL
Sbjct: 81  KVAQRYGAGQFSEIGPLVRQSLWLAVVVGITASLLLLCAEPILHVMNVEPDLIEPSMGYL 140

Query: 121 RGIGTGLPAVALYHVLRCFSDGLGRTRPAMVLGLCGLALNIPLNYIFIYGHLGVPAMGGV 180
            GI  G+PA+ALY+VLRCFSDGLGRTRP+MV+GLCGLALNIPLNYIFIYGHLGVPAMGGV
Sbjct: 141 HGIAAGMPAIALYYVLRCFSDGLGRTRPSMVMGLCGLALNIPLNYIFIYGHLGVPAMGGV 200

Query: 181 GCGWATAIVMWVMALGMAGWARWAPAYQSSRLFSRFDWPQWAVIKRLLGIGLPIGIAVFA 240
           GCGWATAI MWVM LG+A W RW PAYQSS L+ RFDWPQWAVIKR+L IGLPIGIA+FA
Sbjct: 201 GCGWATAIAMWVMMLGLAVWTRWGPAYQSSELYKRFDWPQWAVIKRVLSIGLPIGIAIFA 260

Query: 241 ESSIFAVIALLIGSLGATVVAGHQIALNFSSLVFMIPYSLGMAVTVRVGQALGRAQPREA 300
           ESSIFAVIALLIGSLGATVV+GHQIALN SSLVFMIPYSL MAVTVRVGQALGR +PREA
Sbjct: 261 ESSIFAVIALLIGSLGATVVSGHQIALNVSSLVFMIPYSLSMAVTVRVGQALGRGEPREA 320

Query: 301 RFAAGVGMGTALAYACLSASLMFALRGPIAAIYTADPVVIEVASMLIVYAALFQFSDAIQ 360
           RFAAGVGMGTALAYACLS SLM   R  IAAIYT DPVVI +ASMLIV++ALFQFSD+IQ
Sbjct: 321 RFAAGVGMGTALAYACLSCSLMLLFREQIAAIYTPDPVVIHLASMLIVFSALFQFSDSIQ 380

Query: 361 VTAAGALRGYQDTRVTMILTLFAYWGIGLPVGYALGLTDWLGAASGPSGLWQGLIVGLSC 420
           VTAAGALRGYQDTRVTM+LTLFAYWG+GLPVGYALGLT+WLG  SGPSGLWQGLIVGLSC
Sbjct: 381 VTAAGALRGYQDTRVTMVLTLFAYWGVGLPVGYALGLTNWLGEPSGPSGLWQGLIVGLSC 440

Query: 421 AALMLSIRLARSARKQIRISRS 442
           AA ML +RLARSAR++IR  ++
Sbjct: 441 AAGMLLVRLARSARRRIRADKA 462