Pairwise Alignments

Query, 590 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas fluorescens FW300-N2E2

Subject, 599 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  527 bits (1357), Expect = e-154
 Identities = 274/569 (48%), Positives = 380/569 (66%), Gaps = 1/569 (0%)

Query: 16  FIAPYRKQVAGALLALIVTAGITLSMGQGIRLLVDQGFMTRSPHLLNQSIGLFMVLVVGL 75
           ++  YR  +A AL AL++++  TL++   +R ++D GF T    ++N    + + + V L
Sbjct: 24  YLRRYRGLMAAALFALVLSSATTLALPLAVRRIIDHGFQTPDGGMINSYFAMLLAIAVVL 83

Query: 76  AIGTFARFYLVSWIGERVVADIRRQVFNHLVYLHPGFYENNRSSEIQSRLTADTTLLQSV 135
           A+ +  R+Y V  IGERVVAD+RR VF HL  L   F+++NRS E+ SRLTADT  ++S 
Sbjct: 84  ALASAMRYYYVMTIGERVVADLRRDVFAHLTTLSQQFFDSNRSGELTSRLTADTVQIRSA 143

Query: 136 IGSSLSLFLRNALMVVGGIVLLFITNPKLTSIVVIALPLVLAPILVFGRRVRSLSRQSQD 195
            GSS S+ LRN +M  G + ++  T+P L+ + ++A+P ++ P++ FGR VR+ SR +QD
Sbjct: 144 FGSSASVALRNIIMCCGAVAMMIYTSPGLSGLALLAIPFIVFPLIAFGRSVRARSRTTQD 203

Query: 196 RIADVGSYVSETLGQIKTVQAYNHQVQDEQRFSVTVEQAFDTARKRIAQRAWLITLVIVL 255
            +A+  +Y SET+   +TVQ++N +V    R+  +VE A+  AR  I  R+ L  + I L
Sbjct: 204 TLANSAAYASETIAASRTVQSFNAEVLANARYGASVEAAYQGARAAIGARSVLTAVAIAL 263

Query: 256 VLGAVGVMLWVGGMDVIAGRISGGELAAFVFYSLIVGSAFGTLSEVIGELQRAAGAAERI 315
           V G+V  +LW G  +V+AG ++ G L  FV YS+I  S  G LSEV GEL +A GAAER+
Sbjct: 264 VFGSVVGILWYGAQNVLAGSMTAGTLGQFVLYSVIAASGLGQLSEVWGELAQAGGAAERL 323

Query: 316 AELLRSQNIIQPPASGLVTLPERVRGDLRLEGVRFSYPSRPDSYAVDGLDLTIKAGETLA 375
           +ELL  ++ +  PA+  V +P+  RG+   + V F YP       V GL L + AGET+A
Sbjct: 324 SELLNERSPVAEPAAP-VAMPQPPRGEAEFDNVDFVYPLATGRPIVSGLSLKVAAGETVA 382

Query: 376 LVGPSGAGKSTVYDLLLRFYDPVQGQILIDDVPLTRLDPLDLRRHFALVSQNPALFFGTV 435
           +VGPSGAGKSTV+ LL+RFYDP QG+I ID V +  +   DLR   ++V Q+ A+F  ++
Sbjct: 383 IVGPSGAGKSTVFSLLMRFYDPQQGRITIDGVDIRNVSLADLRARLSIVPQDVAIFASSI 442

Query: 436 EENIRYGNPGATSEQVREAAQIAHAHDFIEKMPGGYQTHLGDGGQGLSGGQRQRLAIARA 495
            +NI +G P AT E VR AA  A A  FIE++  GY T +G+ G  LSGGQRQR+AIARA
Sbjct: 443 HDNIAFGRPEATREDVRAAAIAAQADGFIERLGDGYDTQVGERGVTLSGGQRQRIAIARA 502

Query: 496 LLVDAPILLLDEATSALDAQSEHLIQQALPNLMKNRTTLVIAHRLATVKNADRIAVMDQG 555
           +L DAPILLLDEATSALDA+SE L+Q+AL  LMK RTT+VIAHRLATV  ADRI VMD+G
Sbjct: 503 ILRDAPILLLDEATSALDAESETLVQKALDELMKTRTTIVIAHRLATVLKADRILVMDEG 562

Query: 556 KVVAVGTHQELVASNALYARLAALQFNVG 584
           +++  GTHQ L+  N LYARLA LQF  G
Sbjct: 563 RIIEEGTHQSLIRQNGLYARLARLQFQTG 591