Pairwise Alignments

Query, 294 a.a., NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) from Pseudomonas fluorescens FW300-N2E2

Subject, 288 a.a., Nickel/cobalt efflux transporter RcnA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  395 bits (1016), Expect = e-115
 Identities = 187/293 (63%), Positives = 231/293 (78%), Gaps = 8/293 (2%)

Query: 1   MPNFAELLQQGGTHAWLYFPSAILLGALHGLEPGHSKTMMAAFIVAIRGSVKQAVLLGLA 60
           M  F+ LLQQG  + W + PSAILLG LHGLEPGHSKTMMAAFI+AI+G+VKQAV+LGLA
Sbjct: 1   MGEFSTLLQQG--NGWFFIPSAILLGILHGLEPGHSKTMMAAFIIAIKGTVKQAVMLGLA 58

Query: 61  ATLSHTVVVWLVAIGGMYLGQGLDAETTEPYFQLASAALIVAIALWMLWRTWRGERMFRF 120
           ATLSHT +VWL+A+GGMYL +   A++ EP+ QL SA +I++ A WM WRTWRGE+ +  
Sbjct: 59  ATLSHTAIVWLIALGGMYLSRAFTAQSVEPWLQLISAIIILSTACWMFWRTWRGEQQWL- 117

Query: 121 QQGHDHHHHHDHDHDHDHDHDHDHDHDHHHEHDH-GHPEPKGLVLSLEGYQDAHEQAHAN 179
               +HHH HDHDHDHDHDHDHDHDHDH H+HDH GH  P+G   + + YQDAHE+AHA 
Sbjct: 118 --AGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGA--TSKAYQDAHERAHAA 173

Query: 180 DIRKRFTNRQVTTGQIIVFGLTGGLIPCPAAITVLLLCLQVKEVALGGLLVLCFSIGLAI 239
           DI++RF  + VT GQI++FGLTGGLIPCPAAITVLL+C+Q+K   LG  +VL FS+GLA+
Sbjct: 174 DIQRRFDGQTVTNGQILLFGLTGGLIPCPAAITVLLICIQLKAFTLGATMVLSFSLGLAL 233

Query: 240 TLVTVGAAAAIGARQASNRWPWLGTVARRAPYLSSVLIIGVGLYVGIHGWIGL 292
           TLVTVG  AAI  +QA+ RW    T+ARRAPY SS+LI  VG+Y+GIHG+ G+
Sbjct: 234 TLVTVGVGAAISVQQAAKRWSGFSTLARRAPYFSSILIGLVGVYMGIHGYTGI 286