Pairwise Alignments

Query, 273 a.a., Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N2E2

Subject, 282 a.a., shikimate dehydrogenase from Pseudomonas simiae WCS417

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 34/260 (13%)

Query: 27  HNHLYEQLGLNFYYKAFSSQDL-------PGAVGGIRALGIRGCGVSMPFKEACIALVDE 79
           H    +  GL + Y+    + L       P  +     +   G  ++ P K+A + L+DE
Sbjct: 23  HEQEGDARGLRYLYRLIDLEPLHLDTNALPHLLDAAELMHFTGLNITYPCKQAILPLLDE 82

Query: 80  LDPSAAAIESINTIVNTNGHLKAYNTDYIAIAQLLQSHAVPKD---STFALRGSGGMAKA 136
           L   A  I ++NT+V  +G    +NTD +  A+  + +   KD         G+GG   A
Sbjct: 83  LSDEARGIGAVNTVVFKDGKRIGHNTDCLGFAEGFRRNL--KDVARQRVVQMGAGGAGAA 140

Query: 137 VASALRDGGYQNGLIVARNEAAGRALAESLGYEWQADLGTRRPQM-------------LI 183
           VA AL   G Q   I   + +  R L ++L   +    GT R Q+             L+
Sbjct: 141 VAHALLAEGVQQLSIFDVDISRARDLVDNLAQRF----GTGRAQVGSQLENAMAEADGLV 196

Query: 184 NVTPIGMTGGPEADQLAFEPETIVAAET-VFDVVAIPSETPLIVRARAEGKRVITGLEVI 242
           N TP+GM   P        P T++  E  V ++V  P ET L+  ARA G R + G  + 
Sbjct: 197 NTTPMGMAKLPGTP----VPATLLRTELWVAEIVYFPLETELLRDARALGCRTLDGGNMA 252

Query: 243 AIQALEQFVLYTGVRPNLEQ 262
             QA++ F L++G  P+ ++
Sbjct: 253 VFQAVKAFELFSGEVPDAQR 272