Pairwise Alignments

Query, 397 a.a., RND efflux system, membrane fusion protein CmeA from Pseudomonas fluorescens FW300-N2E2

Subject, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Paraburkholderia sabiae LMG 24235

 Score =  315 bits (807), Expect = 2e-90
 Identities = 172/359 (47%), Positives = 240/359 (66%), Gaps = 2/359 (0%)

Query: 15  ILVCLIVLFMLGGCSG-ESAPTPEPPKVSVITVQPQSQALTTELAGRTQAFMVAEIRPQV 73
           +L       ML  C   +SAP P+ P+V V+TVQPQ+  + TEL GRT AF+VA++R +V
Sbjct: 10  LLTAATAAVMLAACGQKQSAPPPQTPEVGVVTVQPQAVPVVTELPGRTSAFLVAQVRARV 69

Query: 74  GGIVQQRLFVEGAEVKAGQALYQLDASSYKAALAEAQANLAKARATLKSAQATAKRDAQL 133
            GIV +R F EG +VKAGQ LY++D + Y A L  A+A+LAKA+A L S  A A R   L
Sbjct: 70  DGIVLRREFTEGTQVKAGQRLYKIDPAPYIATLNNAKASLAKAQANLASTTAQANRFKVL 129

Query: 134 VKIDAISQQDNEDAQANLMTAEAEVQVAQADVDTARINLAYTRISSPVSGRVETSTVTPG 193
           V  +A+S+QD ++A A    A A+V   +A VDTA+INL YT + SPVSG+V  S VTPG
Sbjct: 130 VAANAVSKQDYDNAVAAEGQAAADVAAGKAAVDTAQINLGYTDVVSPVSGQVGISQVTPG 189

Query: 194 ALVVANQDSALTTVQQLDPMYVDVTQSTTELLRLKRDLASGVLQSNGEGEARIRLKLDDG 253
           A V A+Q + ++TVQQLDP+YVDVTQS+   L+L+R++ +G L++NG   A++ L L+DG
Sbjct: 190 AYVQASQATLMSTVQQLDPVYVDVTQSSLAGLKLRREIQAGRLKTNGPNAAKVELILEDG 249

Query: 254 STYAHEGRLKFSGVSVNEGTGTVTLRAQIANPDRLLLPGMYVRAVLEQARDDKAILIPQK 313
             Y+ +G+L+F+ V+V++ TG+VT+RA   N D +LLPGM+VRA +E+  D+ A+L+PQ 
Sbjct: 250 RVYSEKGKLQFTDVTVDQTTGSVTIRAIFPNKDHVLLPGMFVRARIEEGVDENALLVPQI 309

Query: 314 AVTRSASGATSVLVV-VDGKVEQRMLTIDRAVDNQWWVTAGLNAGDQVIVEGGQKVRVG 371
            VT    G  + +V+  D KVE R L         W V  GLNAGD+VIV G  K++ G
Sbjct: 310 GVTHDQKGQPTAMVLNKDDKVELRTLQASSTYGQYWVVEGGLNAGDRVIVNGVDKIKPG 368