Pairwise Alignments

Query, 284 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens FW300-N2E2

Subject, 296 a.a., transcriptional repressor of rpiB expression (VIMSS) from Escherichia coli BW25113

 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 49/218 (22%), Positives = 99/218 (45%), Gaps = 5/218 (2%)

Query: 15  LTPSERKVVRALLDHYPRNGLGPMSRLADHAGVSDPTIVRLVKKLGFSGYAEFQDALLSD 74
           +T +E ++V  LL     +    +  +A+   VS+  IV++ K LGFSG+   + AL   
Sbjct: 27  MTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSAL--- 83

Query: 75  MDHRLRSPRTLLKPRAKLQQG-DTWSQYLAASQRNLIDTQALTQPEDVRILVQWLLDSRH 133
            D+  +S + L    A  +   D  ++    + R +++ Q++   +++    ++   +R 
Sbjct: 84  EDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQAR- 142

Query: 134 QVHCFGGRFSSFLAHYLLNHLRLLRAGCFALEDNAQLPDRLFDVQRQDVVLIFDYRRYQA 193
           Q   +G   S+ +   + +    +   C A  D   +      +Q  DVVL+  +    +
Sbjct: 143 QRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTS 202

Query: 194 QALRVASAAKERHARVVLFSDVYASPLRELADLIISAP 231
                   AK+  A+++  +  Y SP+ +LAD II +P
Sbjct: 203 DVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSP 240