Pairwise Alignments

Query, 516 a.a., DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster from Pseudomonas fluorescens FW300-N2E2

Subject, 653 a.a., DNA topoisomerase III (NCBI) from Escherichia coli BW25113

 Score =  323 bits (827), Expect = 2e-92
 Identities = 187/456 (41%), Positives = 259/456 (56%), Gaps = 13/456 (2%)

Query: 24  MRLFLCEKPSQGKDIARVLGARQR-GSGCFK-GVGISVTWCIGHLVEAAPPETYDERFKQ 81
           MRLF+ EKPS  + IA VL    R G G  + G G  VTWCIGHL+E A P+ YD R+ +
Sbjct: 1   MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQPDAYDSRYAR 60

Query: 82  WSLDHLPILPISWRVRVKANTAAQYKIVKQLLAQTSELVIATDADREGEMIAREVLELCQ 141
           W+L  LPI+P  W+++ + +   Q  ++K+ L + SE+V A D DREG+++  EVL+  Q
Sbjct: 61  WNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAGDPDREGQLLVDEVLDYLQ 120

Query: 142 Y----RGSIQRLWLSALNDASIRKALSQLRQAEETQSLYHSALARSRADWLIGMNMSRLF 197
                R  +QR  ++ LN  ++ +A+ +LR   E   L  SALAR+RADWL G+NM+R +
Sbjct: 121 LAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAY 180

Query: 198 TLLGRQAGLNGVLSVGRVQTPTLRLVVDRDREIERFVPRPYWVIQVKLEV-LGQAFTAQW 256
           T+LGR AG  GVLSVGRVQTP L LVV RD EIE FV + ++ ++  +     + FTA W
Sbjct: 181 TILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIW 240

Query: 257 AAPDSA---TDEAGRCIRQAIALQAQQSFKATGVAQVLEVETQRTREAPPLPFDLNTLQE 313
              ++     DE GR + + +A            A V     +R  E+ PLPF L+ LQ 
Sbjct: 241 QPSEACEPYQDEEGRLLHRPLAEHVVNRISGQ-PAIVTSYNDKRESESAPLPFSLSALQI 299

Query: 314 VCSRRLGYGVQETLDIAQSLYETHKATTYPRTDSGYLPESMLLEAEAVFAALIKSDPGVG 373
             ++R G   Q  LDI Q LYETHK  TYPR+D  YLPE       AV  A+    P + 
Sbjct: 300 EAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRHAVMNAISVHAPDLL 359

Query: 374 PLVQSVDFTLRSRAWNDSQVSAHHGIIPTLEPFDRLALSERECAVYELIRARYLAQFLPP 433
           P    VD  +R+R W+D +V AHH IIPT      + L+E E  VY LI  +YL QF P 
Sbjct: 360 P-QPVVDPDIRNRCWDDKKVDAHHAIIPTARS-SAINLTENEAKVYNLIARQYLMQFCPD 417

Query: 434 HEYDRTAVQLTCGNHVLKAHGKHVVESGWHRVLGSE 469
             + +  ++L        A  + + E+GW  +LGS+
Sbjct: 418 AVFRKCVIELDIAKGKFVAKARFLAEAGWRTLLGSK 453