Pairwise Alignments

Query, 378 a.a., Outer membrane protein romA from Pseudomonas fluorescens FW300-N2E2

Subject, 362 a.a., Outer membrane protein romA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  224 bits (570), Expect = 4e-63
 Identities = 128/324 (39%), Positives = 185/324 (57%), Gaps = 9/324 (2%)

Query: 43  DGVFRNQIDTPMKTTDQSEISMWMQTLFGQEGQPRPPSPIPAVKTD---LKALDPTQDIV 99
           DG+FRN  D   + T+ +   +W + LF       P  PIP  + D   L ALDP  + +
Sbjct: 40  DGLFRNAPDPSTRPTEGAW-KIWSRFLFETPVGAVPLDPIPVRRLDRATLDALDPVANHI 98

Query: 100 VWLGHSSYFVQLGGQRILIDPVFSTYAAPIPGVN-KAFEGTSLYTADDIPEIDALLISHD 158
           V LGHSS+ ++L G+  LIDPVFS  A+P+  +  K F    L + D++P ID L++SHD
Sbjct: 99  VRLGHSSHLLKLQGRYWLIDPVFSERASPVQWLGPKRFHAPPL-SLDELPPIDGLILSHD 157

Query: 159 HYDHLDYPTVLALQPKVRKVIVGLGVGAHFERWGYDMGVVREADWNEVIALTPNVRVHVT 218
           HYDHLD  T+ AL+ +V++  V LGV    +  G D   V+E DW +       V++  T
Sbjct: 158 HYDHLDQATIEALRERVQRYFVPLGVRERLQGMGVDPQRVQEFDWWQETRHA-GVQLTAT 216

Query: 219 TARHYSGRT-FTRDQSLWVGFALVSPEQRLFFSGDSGYGPHFAEIGQRMGPFDYVAIDAG 277
            A H+SGRT + R+ +LW  + + S ++R+FFSGDSGY   F  I +R+GP D   ++ G
Sbjct: 217 PAHHFSGRTLWDRNSTLWASWFIQSGQERIFFSGDSGYFAGFKAIAERLGPIDIALLENG 276

Query: 278 QYDPRWANVHMNPEQAAQAAKDLHARVLMQTHVGRFSIAPHDWDDPFKRMQVASQGQTFA 337
            YD  W + HM+PE+  QA KDL A+ L   H   F++  H W DP  R+   ++ +   
Sbjct: 277 AYDSYWPSAHMSPEETVQAFKDLRAKQLYLVHNSTFNLGFHTWHDPMDRVADIAEREGLP 336

Query: 338 LWTPEIGRTVYLDGRAQSFTAWWE 361
           L TPEIG  + L GR +    WW+
Sbjct: 337 LATPEIGEVLTL-GRPRQNQRWWK 359