Pairwise Alignments

Query, 310 a.a., TcuR: regulates tcuABC genes used in utilization of tricarballylate from Pseudomonas fluorescens FW300-N2E2

Subject, 298 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  104 bits (259), Expect = 3e-27
 Identities = 84/285 (29%), Positives = 131/285 (45%), Gaps = 4/285 (1%)

Query: 1   MELRQLRYFVRVVECGSMGRAALELDVVTSALSQQISRLENELSVRLLLRKKSGVQPTSA 60
           M LR LR FV VV  GS  +AA  + +  S++S+ +  LE+EL   LL R     + T+A
Sbjct: 1   MNLRTLRTFVEVVRQGSFSQAADVVSLTQSSVSKAVKTLEDELGTPLLSRIGHRSELTAA 60

Query: 61  GLAFWHRAQLVLRNAEDAAHAAR--TGRFAGHVTVGLAPSTSGVVALPFMEAMRERYPDI 118
           G   + RA  +L    D         G   G + +GL P  SG +        R RYPDI
Sbjct: 61  GEIVYRRALTLLAERNDLLTELNDLRGLKGGVLRIGLPPVGSGALFAAMFTQYRARYPDI 120

Query: 119 SLRIVEALSGNLERMLSARQIDLAILFGAD-HGRRFSTQPLVNERLFAISAADFSLVRKS 177
            +++ E  +  L   L++ +++LA L   +     F  Q +  E +  + A +  L  K 
Sbjct: 121 DIQLTEHGASKLHECLASGEVELAALLKMNSFSEEFDYQDVRIEPVVVVMAENHPLA-KR 179

Query: 178 ESLSISELSNVPLILPGSTHGLRALINNAFEREGCTMNVIAEIDGLAILMDAVGAGLGMT 237
           + + I +L+  P IL  +   L  +I  A +R+G T  V A    +  ++D V AGLG+ 
Sbjct: 180 KRVVIEDLAETPFILFEAGFALNTMIKLACDRKGVTPKVTARSGQVDFIVDLVSAGLGVA 239

Query: 238 VQPSAALARHDKDRFDTVPISEFNFTRLNQVASLSDDELSPAGLA 282
             P     +H  D    V ++E +      +A   +  LSPA  A
Sbjct: 240 FLPRMLAQKHYHDGIRLVALNEPDTDWHMVLAWRKNAHLSPAAEA 284