Pairwise Alignments

Query, 310 a.a., TcuR: regulates tcuABC genes used in utilization of tricarballylate from Pseudomonas fluorescens FW300-N2E2

Subject, 305 a.a., DNA-binding transcriptional dual regulator of nitrogen assimilation (NCBI) from Escherichia coli BW25113

 Score =  143 bits (360), Expect = 6e-39
 Identities = 96/307 (31%), Positives = 159/307 (51%), Gaps = 16/307 (5%)

Query: 1   MELRQLRYFVRVVECGSMGRAALELDVVTSALSQQISRLENELSVRLLLRKKSGVQPTSA 60
           M  R+L+YFV++V+ GS+ +AA  L +   ALSQQ++ LE EL+ +LL+R K GV PT A
Sbjct: 1   MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDA 60

Query: 61  GLAFWHRAQLVLRNAEDAAHAART--GRFAGHVTVGLAPST-SGVVALPFMEAMRERYPD 117
           G   +  A+ +LR  E A  A        +G V++G AP T +  + +P ++A+R  +P+
Sbjct: 61  GKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPE 120

Query: 118 ISLRIVEALSGNLERMLSARQIDLAILFGADHGRRFSTQPLVNERLFAISAADFSLVRKS 177
           I + + E     L   L   Q+D+A+++        S+Q L+ E LF +   D       
Sbjct: 121 IVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDC----PG 176

Query: 178 ESLSISELSNVPLILPGSTHGLRALINNAFEREGCTMNVIAEIDGLAILMDAVGAGLGMT 237
           +S+ ++ ++ + L LP     +R  ++ AF     T  VI EI+ +A L  A+ +G+G+ 
Sbjct: 177 QSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVA 236

Query: 238 VQPSAAL-----ARHDKDRFDTVPISEFNFTRLNQVASLSDDELSPAGLAARVVLADVVR 292
           V P +A      A +      T P    + + LN  A  +   LSP   A + +L  V+ 
Sbjct: 237 VLPESAARSLCGAVNGWMSRITTPSMSLSLS-LNLPARAN---LSPQAQAVKELLMSVIS 292

Query: 293 TLVSDKR 299
           + V +KR
Sbjct: 293 SPVMEKR 299