Pairwise Alignments
Query, 280 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2
Subject, 348 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113
Score = 213 bits (542), Expect = 5e-60
Identities = 116/272 (42%), Positives = 174/272 (63%), Gaps = 4/272 (1%)
Query: 1 MTLAVLLSIAQSWPMMLLATAATVCLSALVGLALV-WAGIPASTAAWGTAPGAASAMVSM 59
+T ++L ++A +WP++L T+ SA+VG LV ++ +P +T AWG++PG A+AMV+M
Sbjct: 69 LTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAM 128
Query: 60 ADEYGADSRVVATMQYVRVVCVVMIGALVSHWVGAPTGGET--HVTNVEPQSFGLLNLGL 117
A +YGAD R+VA MQY+RV+ V LV+ + H+ P S LL L +
Sbjct: 129 AQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMMLGDNAEAVNQHIVWFPPVSINLL-LTI 187
Query: 118 TIATLLAGVALGNRVPAGALLMPLLLGGALQISGLLHIALPDWLLATAYGALGCYVGLRF 177
+A + V R+P+G +L+P+L G LQ L+ I LP+WLLA AY A+G +GL F
Sbjct: 188 LLAVVAGTVGCLLRLPSGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGF 247
Query: 178 DRPTIGYVWRRLPAMIMGATLLIALCALSAWLLATISDRDFLSIYLATSPGGLDTMAIIA 237
D+ + R LP +++ L+A+CA AW L DF++ YLATSPGGLDT+A+IA
Sbjct: 248 DKQILLRALRPLPQILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPGGLDTVAVIA 307
Query: 238 VDTHSDVGLVLAMQTLRLFAVILTGAFVARLI 269
+++D+ L++AMQTLRLF+++LTG +AR I
Sbjct: 308 AGSNADMALIMAMQTLRLFSILLTGPAIARFI 339
Score = 50.8 bits (120), Expect = 4e-11
Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 117 LTIATLLAGVA-LGNRVPAGALLMPLLLGGALQISGLLHIALPDWLLATAYGALGCYVGL 175
L + +LL + L +PA LL P++ G + G+ + LP A LGC +
Sbjct: 9 LCVLSLLLSIGFLAVHLPAALLLGPMIAGIIFSMRGIT-LQLPRSAFLAAQAILGCMIAQ 67
Query: 176 RFDRPTIGYVWRRLPAMIMGATLLIALCALSAWLLATISDRDFLSIYLATSPGGLDTMAI 235
+ + P ++ + + A+ WLL S + +SPGG M
Sbjct: 68 NLTGSILTTLAVNWPIVLAILLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVA 127
Query: 236 IAVDTHSDVGLVLAMQTLRLFAVILTGAFVARLII 270
+A D +D+ LV MQ LR+ V V R+++
Sbjct: 128 MAQDYGADIRLVAFMQYLRVLFVAGAAVLVTRMML 162