Pairwise Alignments

Query, 280 a.a., Putative transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 348 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 8/254 (3%)

Query: 6   LLSIAQSWPMMLLATAATVCLSALVGLALVWAGI--PASTAAWGTAPGAASAMVSMADEY 63
           ++  A++WP+  +     V +   V   ++  G     +TA  G +PG  S ++S+  E 
Sbjct: 77  VIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAMLGASPGHLSYIISLGAET 136

Query: 64  GADSRVVATMQYVRVVCVVMIGALVSHWVGAPTGGETHVTNVEPQSFGLLNLGLTIA-TL 122
            +D   V+ +Q VRV+ + +   L+  +       E  +TN      G   L LTIA +L
Sbjct: 137 KSDLATVSIVQSVRVLALTLSVPLIVEYFDL-VSTEPLITN---PPMGFFTLALTIAASL 192

Query: 123 LAG-VALGNRVPAGALLMPLLLGGALQISGLLHIALPDWLLATAYGALGCYVGLRFDRPT 181
           L G + L  + PA  LL  + +     I+GL    +P WL    Y  +GC +G RF   +
Sbjct: 193 LTGWLFLRWKFPAALLLGGVAISIGTHITGLTEGGVPSWLSLPVYVLIGCLIGTRFSNVS 252

Query: 182 IGYVWRRLPAMIMGATLLIALCALSAWLLATISDRDFLSIYLATSPGGLDTMAIIAVDTH 241
           +  V +   A  +    ++ +    AWL++ ++     ++ +A +PGGL+TMA +AV  H
Sbjct: 253 LMEVRKGFLAGFVVTIAVMVIAGTIAWLISRVTGVPLNAVMIAYAPGGLETMAAMAVMMH 312

Query: 242 SDVGLVLAMQTLRL 255
           +D   V +   +RL
Sbjct: 313 ADTAYVGSHHVIRL 326



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 8/177 (4%)

Query: 106 EPQSFGLLNLGLTIATLLAGVALGNRVPAGALLMPLLLGGALQISGL--LHIALPDWLLA 163
           E  +F L  L  ++  LLA +     +PA  L  P L   A+ I+GL  + + +P ++  
Sbjct: 6   EFHTFALTALVGSMGALLASLL---HIPAPFLSGPAL---AVTITGLAGVKLGIPAFIRN 59

Query: 164 TAYGALGCYVGLRFDRPTIGYVWRRLPAMIMGATLLIALCALSAWLLATISDRDFLSIYL 223
             +  +G  +G       I        + I+    ++ +  ++ W+L      D  +  L
Sbjct: 60  ACFVVVGISMGTSVTPSVIDAAKTWPLSFIVVLVAVVIMLYVAYWILHYGFGYDRTTAML 119

Query: 224 ATSPGGLDTMAIIAVDTHSDVGLVLAMQTLRLFAVILTGAFVARLIIRLSEHRQITS 280
             SPG L  +  +  +T SD+  V  +Q++R+ A+ L+   +      +S    IT+
Sbjct: 120 GASPGHLSYIISLGAETKSDLATVSIVQSVRVLALTLSVPLIVEYFDLVSTEPLITN 176



 Score = 27.7 bits (60), Expect = 4e-04
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 17  LLATAATVCLSALVGLALVW-----AGIPASTAAWGTAPGAASAMVSMADEYGADSRVVA 71
           L     T+ +  + G  + W      G+P +      APG    M +MA    AD+  V 
Sbjct: 261 LAGFVVTIAVMVIAG-TIAWLISRVTGVPLNAVMIAYAPGGLETMAAMAVMMHADTAYVG 319

Query: 72  TMQYVRVVCVVMIGALV 88
           +   +R++ + ++  LV
Sbjct: 320 SHHVIRLLFLSVLMPLV 336