Pairwise Alignments

Query, 264 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., murein peptide degradation regulator from Escherichia coli BL21

 Score =  228 bits (580), Expect = 1e-64
 Identities = 107/261 (40%), Positives = 169/261 (64%)

Query: 2   LSHSIQRLEARVGVRLLTRTTRSVSVTEAGERLLNTVEPRLREIETELIAVAEFGDTPAG 61
           LS  ++R+E R+G+RLLTRTTRSV  TEAGE LL+ + P L +I++ + ++++  + P+G
Sbjct: 35  LSQIVRRIEERLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSG 94

Query: 62  NIRITATDHVIETVLWPKLAQALPKYPQISVEVVIDYGLTDIVADHFDFGIRLGDGLANG 121
            IRIT  +H  +T+L P +   L  +P+I +++ IDYGLTD+V++ FD G+RLG  +   
Sbjct: 95  TIRITTVEHAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKD 154

Query: 122 IEAVRIAPDMRFVIVGAPSYMESRAMPTRPQDLMEHECINMRLPTRGGLYAWELEKDGQE 181
           + A+RI PD+   IVG+P Y   R++PT    L++H+ IN+ LPT G    W L + G+E
Sbjct: 155 MIAIRIGPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGRE 214

Query: 182 INTRVKGRLVFNGINQILDAAVSGFGLAYVPEDIAQPHLVDGTLVPVMEAWWRTFPGLHL 241
           +  R++G+L+ N I+ I+DAA+ G GLAY+P D  +  + +  L+ V++ +    PG HL
Sbjct: 215 VRVRMEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHL 274

Query: 242 YYSSEREKSRAMQVLIDELRH 262
           YY   R    A  + ID L++
Sbjct: 275 YYPHRRHAGSAFSLFIDRLKY 295