Pairwise Alignments

Query, 831 a.a., FIG005548: transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 799 a.a., adhesin-associated MmpL efflux pump (from data) from Pseudomonas putida KT2440

 Score =  714 bits (1842), Expect = 0.0
 Identities = 372/773 (48%), Positives = 524/773 (67%), Gaps = 20/773 (2%)

Query: 30  ERMIFNHRLLIIAFCVIATLLSAWQARNLTVTTSFDKMLPHGHPFIRNFLDNRDQLRGLG 89
           ER+IFN+R ++IA CV+ ++   WQA  +  +TSF+KM+P  HPFI   +++R+ L  LG
Sbjct: 21  ERLIFNNRPVVIALCVLVSIFLFWQATQIRPSTSFEKMIPLQHPFIEQMMEHRNDLANLG 80

Query: 90  DSVRFVVENRKGDVFDAEYLKTLGQINDELFRIPGVDRTWVKSIWTPVVRWTEVTEEGFV 149
           ++VR  VE   GD+FD +Y++TL QI+DE+F IPGVDR  +KS+W+P VRW+EVTEEGF 
Sbjct: 81  NTVRISVEAVNGDIFDKDYMETLRQIHDEVFYIPGVDRAGLKSLWSPSVRWSEVTEEGFS 140

Query: 150 GGPVMPGNFDGSPETIEQLRLNIARAGVVGSLISTDYHSSMIEIPLLATV-DGQP----- 203
           GG V+P  ++GS ++++ LR N+ ++G VG L+  ++ SS++++PLL +  D Q      
Sbjct: 141 GGEVIPNTYNGSQDSLDTLRDNVLKSGQVGRLVGNNFKSSIVDVPLLESYPDPQDPGKQV 200

Query: 204 -LSYQDLSEALE-RIRVKYEGAD--LGIYITGFAKISGDMIDGIYKVMLFFIVAALVAAL 259
            L YQ  S  LE +IR K++  +  + I+I GFAK  GD+IDG+  V +FF VA ++  +
Sbjct: 201 KLDYQQFSHLLEEKIRDKFQAQNPNVKIHIVGFAKKVGDLIDGLVMVAMFFGVALVITLV 260

Query: 260 IIYFHTRCVRSTALVLLCSVIAVLWQQGLVIAFGGVLDAFTILIPFLIFAIGVSHGLQKM 319
           ++Y+ T C+RST  VL+ +++AV+WQ GL+ A G  LD +++L+PFLIFAIG+SHG+QK+
Sbjct: 261 LLYWFTWCIRSTVAVLITTLVAVVWQLGLMHAVGFGLDPYSMLVPFLIFAIGISHGVQKI 320

Query: 320 NGIAQDIARGTHPWVAARYTFRRLFLPGLIALIADGVGFAVLVLVDIPIIRELALSASLG 379
           NGIA   +   +   AAR TFR+LFLPG+IA++AD VGF  L+++DI +IRELA+ AS+G
Sbjct: 321 NGIALQSSDADNALTAARRTFRQLFLPGMIAILADAVGFITLLIIDIGVIRELAIGASIG 380

Query: 380 FAMLVVTNLILLPVLLSFTGISQEAARRHIIEHDTTIHKLGIDRVWNSLDRFTERRWAVL 439
            A++V TNLILLPV +S+ GIS++A  R   + D T         W  L  F   + A +
Sbjct: 381 VAVIVFTNLILLPVAISYVGISKKAIERS--KKDATCEH----PFWRLLSNFASAKVAPV 434

Query: 440 AIAVALGLTVLALVERSKLQVGDLHAGSPELRPDSRYNRDNAFITSRFGVSSDVFAVMIK 499
           ++ +AL      L     L++GDL  G+PELRPDSRYN+DN FI S +  SSDV  +M+K
Sbjct: 435 SVVLALLAFAGGLWYSQNLKIGDLDQGAPELRPDSRYNQDNNFIISNYSTSSDVLVIMVK 494

Query: 500 TPADQCGSYEALIEADRLARQLSQVPGVQATASLADTVRAYTSGGFEGSPKWFTISDNKG 559
           TP+++C  +  +   D L   +   PGVQ+  SL    +    G  EGS KW T+S N  
Sbjct: 495 TPSEKCSVHSTMAPIDELMWTMENTPGVQSAISLVTVSKQVIKGMNEGSLKWETLSRNPD 554

Query: 560 VLWPQVNNALVWNSQFLNSECSLMPVLAYLSDHKAATLDAVLKVASEFAEQHSVKDRQFL 619
           +L    NN++       N +CSL PVL +L+DHKA TL+ V  VA  FA+ H  +  QFL
Sbjct: 555 IL----NNSIARADGLYNGDCSLAPVLVFLNDHKAETLERVTAVAKAFADSHDKEGLQFL 610

Query: 620 LAAGSAGIEAATNIVVKSVQLEMLLAVYFAVALLCLMTFRSWRAVVVALLPLVLTSLLAE 679
           LAAG+AGIEAATN V+KS +L +L+ VY  VA++CL+TFRS+ A +  +LPLVLTS+L  
Sbjct: 611 LAAGNAGIEAATNEVIKSAELTILILVYICVAVMCLITFRSFAATLCIVLPLVLTSVLGN 670

Query: 680 ALMVQLNIGLKVATLPVVALGVGVGVDYALYLLSVQLEGQRMGLSLQQAYRRAIQFTGKM 739
           ALM  + IG+KVATLPVVALGVG+GVDY +Y+ S      R GL LQ+AY + ++ TGK 
Sbjct: 671 ALMAYMGIGVKVATLPVVALGVGIGVDYGIYIYSRLESFLRAGLPLQEAYYQTLRSTGKA 730

Query: 740 VALVGVTLAVGVVTWVGSPIKFQADMGILLAFMFLWNMLAALVLIPALSHFLL 792
           V   G+ LA+GV TW+ S IKFQADMG++L FM LWNM  AL L+PAL+ FL+
Sbjct: 731 VLFTGLCLAIGVCTWIFSAIKFQADMGLMLTFMLLWNMFGALWLLPALARFLI 783