Pairwise Alignments

Query, 831 a.a., FIG005548: transport protein from Pseudomonas fluorescens FW300-N2E2

Subject, 824 a.a., RND family transporter from Pseudomonas sp. SVBP6

 Score =  886 bits (2289), Expect = 0.0
 Identities = 455/785 (57%), Positives = 579/785 (73%), Gaps = 4/785 (0%)

Query: 12  MSVIRDPALFNRLSGNFFERMIFNHRLLIIAFCVIATLLSAWQA-RNLTVTTSFDKMLPH 70
           + VIR+   F+  SGN  ER++FNHRL  +   ++ TL+  + A   L +  SF+KM+P 
Sbjct: 9   LPVIRNLGDFDTRSGNRLERLVFNHRLPFMLCMLLVTLVLGYMALTRLELRPSFEKMIPQ 68

Query: 71  GHPFIRNFLDNRDQLRGLGDSVRFVVENRKGDVFDAEYLKTLGQINDELFRIPGVDRTWV 130
            HP+I+N+LDNR  LRGLG+S+R VVEN +GD+FD  YL+TL QINDELF   GVDR W+
Sbjct: 69  SHPYIQNYLDNRQSLRGLGNSLRVVVENTRGDIFDPAYLQTLRQINDELFLSQGVDRAWM 128

Query: 131 KSIWTPVVRWTEVTEEGFVGGPVMPGNFDGSPETIEQLRLNIARAGVVGSLISTDYHSSM 190
           KS+W+P VRWTEVTEEGF GGPVMP  + GS   I+QLR NI RA ++GSL++ D+ SSM
Sbjct: 129 KSLWSPAVRWTEVTEEGFQGGPVMPDAYQGSAADIQQLRQNIERANILGSLVARDFKSSM 188

Query: 191 IEIPLL--ATVDGQPLSYQDLSEALERIRVKYE-GADLGIYITGFAKISGDMIDGIYKVM 247
           + +PLL  A+  G  + Y   S  LE++R +YE G    +++ GFAK+ GD+IDG+ +VM
Sbjct: 189 LIVPLLDQASATGASIDYHGFSAKLEQLRQQYEAGGVYKLHVIGFAKLMGDLIDGLLQVM 248

Query: 248 LFFIVAALVAALIIYFHTRCVRSTALVLLCSVIAVLWQQGLVIAFGGVLDAFTILIPFLI 307
           LFF +A L   LIIY +TRCVRST LV+LCS+ AV+WQ G+V   G  +D ++IL+PFLI
Sbjct: 249 LFFALAVLTTLLIIYLYTRCVRSTLLVVLCSLTAVVWQLGIVAWLGYAIDPYSILVPFLI 308

Query: 308 FAIGVSHGLQKMNGIAQDIARGTHPWVAARYTFRRLFLPGLIALIADGVGFAVLVLVDIP 367
           FAIGVSH  QKMNGI QDI RGTH  +AARYTFRRLF+ G+ AL+AD VGFAVL+L+DIP
Sbjct: 309 FAIGVSHAAQKMNGIMQDIGRGTHRQIAARYTFRRLFVAGVTALLADAVGFAVLMLIDIP 368

Query: 368 IIRELALSASLGFAMLVVTNLILLPVLLSFTGISQEAARRHIIEHDTTIHKLGIDRVWNS 427
           +I++LA +AS+G A+L+ T+L+L+PV LS+ G+ ++AA R +          G  ++W+ 
Sbjct: 369 VIQDLATTASIGVAVLIFTSLLLMPVALSYVGVGRKAAERALRIDLRAAEHRGFGKLWDL 428

Query: 428 LDRFTERRWAVLAIAVALGLTVLALVERSKLQVGDLHAGSPELRPDSRYNRDNAFITSRF 487
           LDRFTER+WA  A+ VA+ L         +L++GDL +G+PEL  DSRYNRDNA+IT  +
Sbjct: 429 LDRFTERKWATAAVLVAVLLGAGGFWLSLQLKIGDLDSGAPELHADSRYNRDNAYITGHY 488

Query: 488 GVSSDVFAVMIKTPADQCGSYEALIEADRLARQLSQVPGVQATASLADTVRAYTSGGFEG 547
            +SSD FAVMIKT  + C  Y+ L+ ADRLA  L Q P VQ T SL + VR  T+G +EG
Sbjct: 489 ALSSDTFAVMIKTAPEGCLRYQTLVLADRLAWALQQHPQVQTTLSLTNAVRQITAGTYEG 548

Query: 548 SPKWFTISDNKGVLWPQVNNALVWNSQFLNSECSLMPVLAYLSDHKAATLDAVLKVASEF 607
           +PK  +I  N+ VL      A V   +  N++CSLMPV+AYL DHKA TLD V+ +A  F
Sbjct: 549 NPKLSSIQRNQDVLNYAAQQASVNAPELFNNDCSLMPVIAYLKDHKADTLDQVVAIAERF 608

Query: 608 AEQHSVKDRQFLLAAGSAGIEAATNIVVKSVQLEMLLAVYFAVALLCLMTFRSWRAVVVA 667
           A+ +S +DRQFLLAAGSAGIEAATNIVV+     MLL VY AV L CL+TFRSWRA +VA
Sbjct: 609 AQANSGEDRQFLLAAGSAGIEAATNIVVREANRSMLLLVYLAVTLFCLITFRSWRATLVA 668

Query: 668 LLPLVLTSLLAEALMVQLNIGLKVATLPVVALGVGVGVDYALYLLSVQLEGQRMGLSLQQ 727
           +LPL+LTS+L EALMV + IG+KVATLPV+ALGVG+GVDYALYLLSVQL  QR GLSL Q
Sbjct: 669 VLPLMLTSVLCEALMVTMGIGVKVATLPVIALGVGIGVDYALYLLSVQLHYQRQGLSLAQ 728

Query: 728 AYRRAIQFTGKMVALVGVTLAVGVVTWVGSPIKFQADMGILLAFMFLWNMLAALVLIPAL 787
           AY+ A+ FTG++V LVG+TLA GVV W  SPIKFQADMGILL FMFLWNML AL+LIPAL
Sbjct: 729 AYKNAVAFTGRVVGLVGITLAAGVVGWAWSPIKFQADMGILLTFMFLWNMLGALILIPAL 788

Query: 788 SHFLL 792
           SHFLL
Sbjct: 789 SHFLL 793