Pairwise Alignments

Query, 381 a.a., Multidrug resistance protein B from Pseudomonas fluorescens FW300-N2E2

Subject, 395 a.a., predicted transporter (NCBI) from Escherichia coli BW25113

 Score =  213 bits (541), Expect = 1e-59
 Identities = 119/374 (31%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 4   SLTIVVSRAITSPLLTLFLSNKLGLNQQDVGLLLGIAVFIATLLALYGGYVIDRLEKRRL 63
           SL + + R  T P +T++LS +  L+   +G  + IA+ I  + +L  G + D+ +K+R 
Sbjct: 16  SLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY 75

Query: 64  LILAMLSSAIGFILLTFAENLYLTTMTVVITETASALFLIGSKAILSENLPMGQRAKAFS 123
           ++LA+ + A GFI +T   N+ L  +   +   A ++F    KA  ++NL    + K FS
Sbjct: 76  MLLAITAFASGFIAITLVNNVTLVVLFFALINCAYSVFATVLKAWFADNLSSTSKTKIFS 135

Query: 124 LRYTLTNIGYATGPMLGVVIAGVYPIAPFLIAG-GIAFFSIFLMTGIPRDAALTPVIGQP 182
           + YT+ NIG+  GP LG ++       PF +A    AF  +F+   + R      +I   
Sbjct: 136 INYTMLNIGWTIGPPLGTLLVMQSINLPFWLAAICSAFPMLFIQIWVKRS---EKIIATE 192

Query: 183 PSFLKTLKTLKNDRTLIMFTCGCLLSTVVHGRFTLYLSQYLLVTHDSKRALDIMAALLAC 242
              + + K L  D+ L+ FTC   L++ V G F   +SQY++V  D   A  ++A +L  
Sbjct: 193 TGSVWSPKVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVIADGDFAEKVVAVVLPV 252

Query: 243 NAVTVILLQYQIGRFLDREKLRYWIAAGTSLFILGLIGFSLA-DDMVSWCVAMFIFTLGE 301
           NA  V+ LQY +GR L+   +R  + AGT  F++GL+GF  + + ++ W ++  +FT+GE
Sbjct: 253 NAAMVVTLQYSVGRRLNPANIRALMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGE 312

Query: 302 MIIYPAEFLFVDTLAPEELRGSYYGAQNLAALGGALSPVICGYLLMHTPAPTMFYALSAL 361
           +I  P E++ +D +AP E++ SY+ AQ+L  LG A++P++ G +L   P P+  + + AL
Sbjct: 313 IIYAPGEYMLIDHIAPPEMKASYFSAQSLGWLGAAINPLVSGVVLTSLP-PSSLFVILAL 371

Query: 362 TAMGGLLCFMSGRR 375
             +   +  + G R
Sbjct: 372 VIIAAWVLMLKGIR 385