Pairwise Alignments

Query, 292 a.a., ABC transporter permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 222 a.a., predicted transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  142 bits (358), Expect = 7e-39
 Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 15/209 (7%)

Query: 79  TVVMAVLAMALGIVFGVITAIMRMSANPILRYVALIYTWLFRGTPLILQL-LLWFNLALI 137
           T+ +++  M  G++ G I A+MR+S    +R++A  Y  +FRGTPLI QL ++++ L   
Sbjct: 22  TLQLSIGGMFFGLLLGFILALMRLSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGL--- 78

Query: 138 FPTIGIPGLFEMDTVSLMTPFVAALLGLSINQGAYTAEVVRAGLLSVDTGQYEAAKSIGM 197
            P  GI    E+D      P  +A++GLS+N  AY AE +RA + S+D GQ+EAA SIGM
Sbjct: 79  -PQFGI----ELD------PIPSAMIGLSLNTAAYAAETLRAAISSIDKGQWEAAASIGM 127

Query: 198 PRLQALRRIILPQAMRIIIPPVGNEFIGMVKMTSLASVIQYSELLYNAQNIYYANARVME 257
              Q +RR ILPQA R+ +PP+ N FI +VK TSLA+ IQ  EL   AQ I      V  
Sbjct: 128 TPWQTMRRAILPQAARVALPPLSNSFISLVKDTSLAATIQVPELFRQAQLITSRTLEVFT 187

Query: 258 LLIVAGIWYLATVTVLSFGQSRLERRFAR 286
           + + A + Y    TVLS  Q+  E +  R
Sbjct: 188 MYLAASLIYWIMATVLSTLQNHFENQLNR 216