Pairwise Alignments

Query, 266 a.a., Glycine cleavage system transcriptional activator GcvA from Pseudomonas fluorescens FW300-N2E2

Subject, 313 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  130 bits (326), Expect = 4e-35
 Identities = 92/263 (34%), Positives = 128/263 (48%), Gaps = 5/263 (1%)

Query: 1   VSHQLKHLEQLWGLQLF-HRGNSQHLTSAGAALAPIVREFFMKLEATLADLREQNGRQRL 59
           VS Q++ LE+  G +LF  R     L++ G  LA  V E +  +EA L  L     R  L
Sbjct: 39  VSQQMRQLEERLGYRLFLRRARGVELSAEGQRLAQTVAEAYGSIEAELLRLDAGEIRGTL 98

Query: 60  SVSTTYSFALKWLLPRLPDLAKAHPEILLTLDSTDSPINFSTTDPDVAIRLGNGHFPSLF 119
            V +  SF  KWL PRLP   + +P+I L L + DS    +  D D+AI L +G +P + 
Sbjct: 99  RVRSIPSFLAKWLTPRLPRFQQRYPDIELRLVAEDSAQALTPGDFDLAIDLNDGSYPGML 158

Query: 120 SEFLFREQIFPVASPTLLARFGTPQTAAELLRYPLL----TRDGAALVPKWEQWFAQVGV 175
           S  L  EQIFPV SP LL         A+L  YPLL       G++   +WE +   +G 
Sbjct: 159 STPLLDEQIFPVCSPALLRGRPPLHGPADLAHYPLLHDITAWRGSSEYAEWEFYLEGIGA 218

Query: 176 EVTSLKESIRYADTNMTIEAALLGQGIALARSGHVEAELNDGRLERLFELPCASPLAYYF 235
               ++    +   ++TIEAA+ G G+A+AR   +  EL  G L   F +P A+   Y  
Sbjct: 219 AGLDVRRGHTFNRNHLTIEAAIAGIGVAIARRTLLNDELERGALIVPFGVPIANHKRYVV 278

Query: 236 VCPKGIETQPHITHFRRWLVTQA 258
             P G   QP       WLV +A
Sbjct: 279 HYPPGGLNQPGARAVHDWLVEEA 301