Pairwise Alignments

Query, 301 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score =  120 bits (300), Expect = 5e-32
 Identities = 86/300 (28%), Positives = 149/300 (49%), Gaps = 10/300 (3%)

Query: 1   MPLKDSLLALLVAFLWGAQVTAVKIGGAELPPILMVAMRYAIMALFLLPLLKRVKREQFA 60
           M  KD +LALLV  +WG     +K+G   +PP+++  +R+ ++A   +  + R K     
Sbjct: 1   MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL 60

Query: 61  SVALIATITGTLHFGLLYCGIA-RVDASTSAIIYQLAAPFTLVLAFALLGEVLKLRLLAG 119
            +    TI+    F  L+C I   + A  ++++ Q  A FT++L     GE L  + LAG
Sbjct: 61  LLGYGLTISFA-QFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAG 119

Query: 120 IVLAFAGVLVLLATPSAGG--TFIGMLLVALAALAFAAGSVLTKRLGPLDP----LALSA 173
           I LA  GVLVL+     G     +G +L   AA ++A G++  K++         ++L  
Sbjct: 120 IALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVI 179

Query: 174 WTAVIAAPQLLLWSFVQEGEQWT--RVYTASAQAWWAVLYTALSGGLLGFGLWFWLLGRN 231
           W+A+I      + S + +G       + T       +++Y A    ++G+G+W  LLGR 
Sbjct: 180 WSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRY 239

Query: 232 SMQQLSPYLLLVPVFAIVVSQVMLAEGFSQRLVIGAVLTLSGVALCQLRLPARFFLKAGS 291
              +++P  LLVPV  +  + ++L E  +    +GAVL ++G+ +    L  R  +K GS
Sbjct: 240 ETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS 299