Pairwise Alignments

Query, 360 a.a., Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) from Pseudomonas fluorescens FW300-N2E2

Subject, 317 a.a., 3-oxoacyl-(acyl carrier protein) synthase (NCBI) from Escherichia coli BW25113

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 79/312 (25%), Positives = 133/312 (42%), Gaps = 23/312 (7%)

Query: 6   IVSYGAGIPVCRLKVDDVIQVWKNTDLSLVKGQLGVLERAVLQPDEDVITLGVLAAQRAL 65
           I+  G+ +P  +++ +  ++   +T    +  + G+ ER +  P+E V T+G  AA RA+
Sbjct: 5   IIGTGSYLPE-QVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAI 63

Query: 66  DKA--PPCPLEALYLGTCTNPYDSRASAAIILEMLGC-GYDAFCADVQFAGKSGTSALQI 122
           + A      +  + + T +  +   ++A  I  MLG  G  AF  DV  A    T AL +
Sbjct: 64  EMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAF--DVAAACAGFTYALSV 121

Query: 123 AYALVASGMVGNALAVGADTINRNTAP---GDLTESYAGAGAAALLLGTENVI----AHF 175
           A   V SG V  AL VG+D + R   P   G +     GAGAA L    E  I     H 
Sbjct: 122 ADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHA 181

Query: 176 DASFS--CAADVADNIRPQGDRYIRSGMGLGSDKNSIGLEDQTRRAASGLMAKIHAQAGD 233
           D S+        AD + P+   ++      G++   + + +        L A  +     
Sbjct: 182 DGSYGELLTLPNADRVNPENSIHLTMA---GNEVFKVAVTELAHIVDETLAAN-NLDRSQ 237

Query: 234 FDYVVFQQNLVSTPYSLGKHLGFTTAQIEPGIYAQSVGDAGAASPLLGLVNVLDQAR--P 291
            D++V  Q  +    +  K LG +   +   +     G+  AAS    L   +   R  P
Sbjct: 238 LDWLVPHQANLRIISATAKKLGMSMDNVV--VTLDRHGNTSAASVPCALDEAVRDGRIKP 295

Query: 292 GERILVVSYGFG 303
           G+ +L+ ++G G
Sbjct: 296 GQLVLLEAFGGG 307