Pairwise Alignments

Query, 318 a.a., Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 313 a.a., ABC transporter, substrate binding protein (ribose) from Agrobacterium fabrum C58

 Score =  122 bits (305), Expect = 1e-32
 Identities = 82/310 (26%), Positives = 158/310 (50%), Gaps = 14/310 (4%)

Query: 10  LAVAMLAAASAALPLSSAFAQTAEKPKVALVMKSLANEFFLTMEDGAKAYQKEHSADFDL 69
           +  A+L +A A   +S     T +  ++A+++K++ + F+  ++ GA A  K  S +  +
Sbjct: 4   ITTALLTSAIALWSVS-----TVQAGEIAVIVKTVNSTFWQNVQKGADAAMKNSSGN-TM 57

Query: 70  ISNGIKDETDTANQIRIVEQMIVSKVDALIIAPADSKAMVPVIKKAVDAGITVINIDNQL 129
              G   E+  A+Q+ +VE  I  KV  +++AP+D  A+VP +KKA +A I V+ ID+QL
Sbjct: 58  TFQGPAAESAIADQVNMVENAINRKVAGIVLAPSDPDALVPAVKKAWEARIPVVLIDSQL 117

Query: 130 DPAVVKSKNINVPFVGPDNRKGARLVGEYLAKQLKAGDEVGIIEGVSTTTNAQARTAGFK 189
                 S+     F+  DN+K   L  + L  ++    ++ ++  V+   +   R  GF 
Sbjct: 118 AKG---SEQYYQSFLATDNKKAGELAAQALIDKVGTEGKIAVMSYVAGAGSEIGRVGGFT 174

Query: 190 DAMEA-AQVKVVSLQSGDWEINKGNQVAASMLSEYPNIKALLAGNDSMAVGAVSAVRAAG 248
           D ++  +++++V       ++         +L+   ++K +   N+  A+G   A+  +G
Sbjct: 175 DYIQMHSKLQIVGPFYSQSQMATALNQTTDVLAANSDLKGIFGANEPTAIGVGRALAQSG 234

Query: 249 KAGKVQVVGYDNINAIKPMLKDGRVLATADQFAAKQAVFGIETALKILKGEKVDSGTNGV 308
           KAGKV  +G+D    ++  +KDG +     Q + +    G+ET  K++  EKV+      
Sbjct: 235 KAGKVIAMGFDGNQDLQSFVKDGTLAGIVVQGSYQMGEKGVETVTKLINKEKVEK----F 290

Query: 309 IETPVELVTK 318
           ++T V +VTK
Sbjct: 291 VDTGVVVVTK 300