Pairwise Alignments

Query, 438 a.a., HlyD family secretion protein from Pseudomonas fluorescens FW300-N2E2

Subject, 434 a.a., bacteriocin ABC transporter permease from Agrobacterium fabrum C58

 Score =  253 bits (646), Expect = 8e-72
 Identities = 147/401 (36%), Positives = 220/401 (54%), Gaps = 12/401 (2%)

Query: 33  GVFGTWAAIAPLDGAAYAPGVVTVQAYRKTVQHLEGGIVKALLAHDGDIVKRDDPLIILD 92
           GVFG WA    + GA  A G + V+   K VQH  GG+V  L+  DGD VK  D ++ +D
Sbjct: 27  GVFGGWAVGTEIVGAVIAQGSLVVETSLKKVQHPVGGVVSELMVRDGDRVKAGDVVMRID 86

Query: 93  DAQLRFEYEMARGQLIAARAMEARLIAERDSLPMISFGDIADPDSVRG-------MEARQ 145
               R    +    L    A +ARL  ERD    + F     P S+R        +    
Sbjct: 87  ATMTRANLAIVVKSLDQFTARKARLEGERDRAASVVF-----PQSLRDRAGDAEVLAMMN 141

Query: 146 GETRVFSARQGSRLGQIAVLRERVGQFRQQIKGLESMVGSKVHLEKSYSGEIDELADLLK 205
            E R++  R+  R  +   L +RV Q R +I GLE+   + V  +     E+     L +
Sbjct: 142 AEQRLYEDRRAVRESKKRQLEQRVRQLRDEISGLEAERAANVREQGMVDEELIRFRSLQE 201

Query: 206 QGFVDKQRLLEQERKLGLLRSEVADHRSTIDRTRLQINETQLQILQVDKDFNADVVKQLA 265
           +G +DK RL   ER+   +  ++   R+ I     +I+ET LQILQ+D+ ++ +V   L 
Sbjct: 202 RGLLDKSRLSTLERQATDIDGDIGRLRAGIAGIEAKISETALQILQIDEQWSEEVGSDLR 261

Query: 266 EVQTRIYDLKEKTSALEDRLSRIVIRAPEAGMVIDMSVHTIGGIVRPATPLLDIVPSVSD 325
           E+  RI +  E+  A ED+L R+ I AP+ G+V  ++VHT+GG++ P   ++ IVP V  
Sbjct: 262 EMDARIGEYVERRVAAEDQLKRVDILAPQDGVVHQLAVHTVGGVIAPGEQIMMIVPEVDK 321

Query: 326 LVIEAQVAPVDIDRIAIGKRADIRFGAFNSATTPVIEGEVSSVSADRMTNEKTGTAYYLA 385
           LV+EA+VAP DID+I  G+  ++RF AFN  TTP I G V  +SAD   +++TG +YYL 
Sbjct: 322 LVVEAKVAPQDIDQIYFGQVTNLRFSAFNQKTTPEITGTVERISADVTVDQRTGASYYLV 381

Query: 386 RVRVTEAGARTLGERKLLPGMPADVLIITGQRTLLQYLMQP 426
           RV  ++   + LGE  L+PGMP +  I TG+R++L Y ++P
Sbjct: 382 RVATSQEQIKRLGEFSLMPGMPVEAFITTGERSVLSYFLKP 422