Pairwise Alignments

Query, 398 a.a., Transporter, MFS superfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 405 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

 Score =  114 bits (284), Expect = 7e-30
 Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 18/340 (5%)

Query: 20  AGLVSGVTLVTSAIGGWVGGTLSDRYGRVRTLQWMILWFSFFTFLSAFVTGFHQLLIVKA 79
           A L+  V  +   IGG   G ++D+YGR   + W I  +S  T LS   T  + L + + 
Sbjct: 52  ATLIGTVAFIARPIGGGFFGAMADKYGRKPMMMWAIFIYSVGTGLSGIATNLYMLAVCRF 111

Query: 80  LQGFGIGGEWAAGAVLMAETINPKYRGKVMGTVQSAWAVGWGLAVGV---FTLIYSLVPQ 136
           + G G+ GE+A  +    E+     + K    + S ++VG  +A  +   F  +Y     
Sbjct: 112 IVGLGMSGEYACASTYAVESWPKNLQSKASAFLVSGFSVGNIIAAQIIPQFAEVY----- 166

Query: 137 DMAWRVMFVVGLLPSFLIIWVRRNVEEPDSFQRLKKDNVIPQSFFKSLAGIFRPELIRVT 196
              WR  F +GLLP  L++W+R++  E    Q   +D    +S F S   +FR   + ++
Sbjct: 167 --GWRNSFFIGLLPVLLVLWIRKSAPES---QEWIEDKYKDKSTFLS---VFRKPHLSIS 218

Query: 197 LFGGLLGLGAHGGYHAVMTWLPTFLKTERNLSVLNSGGYLAVIIFAFWCGCVVSGLLIDR 256
           +   L+     G    +   LP++L  +  ++ +     + +       G +  G + D+
Sbjct: 219 MIVFLVCFCLFGANWPINGLLPSYL-ADNGVNTVVISTLMTIAGLGTLTGTIFFGFVGDK 277

Query: 257 IGRRKNIVLFALCCVVTVQCYVFLPLTNTQMLFLG-FPLGFFAAGIPASLGAFFNELYPA 315
           IG +K  V+  +   + +    F+ + N+ ++ L  F L F   GI   +  F  + +P 
Sbjct: 278 IGVKKAFVVGLITSFIFLCPLFFISVKNSSLIGLCLFGLMFTNLGIAGLVPKFIYDYFPT 337

Query: 316 DVRGAGVGFCYNFGRVLSAMFPFLVGHMSDSMSLGSAIGI 355
            +RG G G  YN G       P L  ++S    LG ++ I
Sbjct: 338 KLRGLGTGLIYNLGATGGMAAPVLATYISGYYGLGVSLFI 377