Pairwise Alignments

Query, 367 a.a., Probable periplasmic spermidine/putrescine-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  328 bits (841), Expect = 1e-94
 Identities = 166/362 (45%), Positives = 239/362 (66%), Gaps = 5/362 (1%)

Query: 5   HLRTIFSASLLCAGISTSVAAVEPGMYLYNWFGLLAPETPKEFEQETGTRVHMDAFDSAE 64
           HL+ +  A+      +T+ AA  P + +YNW   +   T  +F+  +G +V  D FDS E
Sbjct: 3   HLQALIPAAFTLLFATTTQAA--PTVSVYNWTDYIGDTTLADFQASSGIKVVYDVFDSNE 60

Query: 65  IMQSKVMAGRTGYDVVVATSNVLPSLIRAGVLQPLDRSQLSNFSHIDPDLLSQLAVNDPG 124
            ++ K++AGRTGYDVVV +++ L    +AG   PLDRS+L N+ H+DP LL QL  NDPG
Sbjct: 61  TLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQLEQNDPG 120

Query: 125 NRYAVPYLWGTTGIGYDVDKVRGALGDNAPVNSWDLIFKEENISKLQSCGVAMLDSPSEI 184
           N+YAVPYLWGT GIGY+VDKV+ ALG +  ++SW ++F+ EN+ KL+ CGVA +DSP E+
Sbjct: 121 NQYAVPYLWGTNGIGYNVDKVKAALGVDH-IDSWAVLFEPENLKKLKQCGVAFMDSPDEL 179

Query: 185 ISIALNYLGLPSNSKNPDDYQKAQALLLKIRPYVLYFDSSKIDADLADGNICAVVGWANG 244
               LNYLG+   S+ P DY KA+A LL++RPY+ YF SSK  +DLA+G++C   G++  
Sbjct: 180 FPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIAFGYSGD 239

Query: 245 ALAAQAINEKANTGRKIAYSLPREGALSWSENLVLLKDAPHPKEGMAFINYMMRPEVIAK 304
              A     +A  G K+AYS+P+EG+  W + L + KDA +P++ +AFINY++ P+VIAK
Sbjct: 240 VFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLDPKVIAK 299

Query: 305 TSNHTLYPNANKDAAEFVERKLRDNPWIYPDKKTIATL-IPLEPLPLKLERIRTRIWTKV 363
            S    Y NAN DA  +++  L +NP IYP ++ +  L I   P P K+ R+ TR W+K+
Sbjct: 300 VSATVGYANANPDAKAYMDASLVNNPEIYPPQEVLDKLYISSTPSP-KIMRVMTRSWSKI 358

Query: 364 KS 365
           KS
Sbjct: 359 KS 360