Pairwise Alignments

Query, 367 a.a., Probable periplasmic spermidine/putrescine-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 370 a.a., putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  345 bits (885), Expect = 1e-99
 Identities = 166/367 (45%), Positives = 245/367 (66%), Gaps = 2/367 (0%)

Query: 1   MRKSHLRTIFSASLLCAGISTSVAAVEPGMYLYNWFGLLAPETPKEFEQETGTRVHMDAF 60
           + K  L  + + +L+   + T +AA +  +++YNW   +AP+T   FE+ETG +V  D F
Sbjct: 4   LNKKWLSGLVAGALMAVSVGT-LAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVF 62

Query: 61  DSAEIMQSKVMAGRTGYDVVVATSNVLPSLIRAGVLQPLDRSQLSNFSHIDPDLLSQLAV 120
           DS E+++ K+MAG TG+D+VV +++ L   + AGV QPLD+S+L  + ++DP+LL  +A 
Sbjct: 63  DSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLKLVAK 122

Query: 121 NDPGNRYAVPYLWGTTGIGYDVDKVRGALGDNAPVNSWDLIFKEENISKLQSCGVAMLDS 180
           +DP N++A+PY+W TTGIGY+VDKV+  LG+NAPV+SWDLI K EN+ KL+SCGV+ LD+
Sbjct: 123 HDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDA 182

Query: 181 PSEIISIALNYLGLPSNSKNPDDYQ-KAQALLLKIRPYVLYFDSSKIDADLADGNICAVV 239
           P E+ +  LNYLG   NS   DDY   A  LLLK+RP + YF SS+   DLA+G+IC  +
Sbjct: 183 PEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAI 242

Query: 240 GWANGALAAQAINEKANTGRKIAYSLPREGALSWSENLVLLKDAPHPKEGMAFINYMMRP 299
           GWA     A    ++A  G  +++S+P+EGA+++ +   +  DA +  E   F+NY++RP
Sbjct: 243 GWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRP 302

Query: 300 EVIAKTSNHTLYPNANKDAAEFVERKLRDNPWIYPDKKTIATLIPLEPLPLKLERIRTRI 359
           +V+A  S+H  Y NANK A   V  ++R+NP IYP     A L  L+    K++R+RTR 
Sbjct: 303 DVVAHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRTRA 362

Query: 360 WTKVKSG 366
           WTKVKSG
Sbjct: 363 WTKVKSG 369