Pairwise Alignments

Query, 333 a.a., Xylose ABC transporter, periplasmic xylose-binding protein XylF from Pseudomonas fluorescens FW300-N2E2

Subject, 330 a.a., D-xylose transporter subunit (NCBI) from Escherichia coli BW25113

 Score =  391 bits (1004), Expect = e-113
 Identities = 197/327 (60%), Positives = 251/327 (76%), Gaps = 1/327 (0%)

Query: 5   KRTLLAGALALLSLPVMADAAHPKIGFSIDDLRLERWSRDRDYFVAAAEKLDAKVFVQSA 64
           K  LL    +LL   V A A   KIG +IDDLRLERW +DRD FV  AE L AKVFVQSA
Sbjct: 4   KNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQSA 63

Query: 65  DANEQKQISQIENLISRGVDVIVIVPFNATVLTNAVAEAKKAGIKVVSYDRLILNADIDA 124
           + NE+ Q+SQIEN+I+RGVDV+VI+P+N  VL+N V EAK+ GIKV++YDR+I +ADID 
Sbjct: 64  NGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMINDADIDF 123

Query: 125 YISFDNEKVGEMQASGVLKAAPKGNYFLLGGAPTDNNAKVLREGQMKVLQPAIDKGDIKI 184
           YISFDNEKVGE+QA  ++   P+GNYFL+GG+P DNNAK+ R GQMKVL+P +D G IK+
Sbjct: 124 YISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNNAKLFRAGQMKVLKPYVDSGKIKV 183

Query: 185 VGQQWVKEWNPTEALSIVENALTRNNNKIDGIVASNDATAGGAIQALAAQKMAGKVPISG 244
           VG QWV  W P  AL I+ENALT NNNKID +VASNDATAGGAIQAL+AQ ++GKV ISG
Sbjct: 184 VGDQWVDGWLPENALKIMENALTANNNKIDAVVASNDATAGGAIQALSAQGLSGKVAISG 243

Query: 245 QDADLAAVKRVIDGTQTMTVYKPLKLIASEAAKLSVQLARNEKPTFSSQYDNGSKKVDTI 304
           QDADLA +KR+  GTQTMTVYKP+ L+A+ AA+++V+L   ++P   +  +NG K V + 
Sbjct: 244 QDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGNGQEPKADTTLNNGLKDVPSR 303

Query: 305 LLTPTPLTKDNI-DLLEKDGFYTKAQI 330
           LLTP  + K+NI D + KDGF+ ++++
Sbjct: 304 LLTPIDVNKNNIKDTVIKDGFHKESEL 330