Pairwise Alignments

Query, 300 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

Subject, 302 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  227 bits (578), Expect = 3e-64
 Identities = 116/289 (40%), Positives = 174/289 (60%), Gaps = 3/289 (1%)

Query: 6   DLSELDAFAAVARHRSFRKAADERGVSASALSHAMRALEARLGVRLLNRTTRSVTPTEAG 65
           ++S+   F AVAR++SFR A DE G+S+SA+SH+++ LE RL +RL NRTTRSV+ TEAG
Sbjct: 4   NMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQRLKIRLFNRTTRSVSLTEAG 63

Query: 66  HQLLATLAPTLQQVAEALTQLTSLQDVPAGKLRLNVARPAARAVFAKVLAPFVARYPRIQ 125
             L   L P   ++   L ++   +  P G L++N AR AAR     +L  F   YP I+
Sbjct: 64  SNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINAARVAARIFLMSLLVGFTREYPDIK 123

Query: 126 LDLVSDDGLTDIVNGGFDAGVRFGESLAGDMIAVPVGPPQSFVTVAAPTYLAAKGIAQAP 185
           ++L +DD L DIV  GFDAGVR    +  DMI+V +GPP      A P Y A  G  + P
Sbjct: 124 VELTTDDSLVDIVQQGFDAGVRLSCIVEKDMISVAIGPPVKLCVAATPEYFARYGKPRHP 183

Query: 186 RDLLDHACIARRFPSGKLYAWEYQAEGQPIRLSVTGPLILEDDALMIQAAKDGAGIAYVY 245
            DLL+H C+  R+PSGK + W++  E   + ++V G +IL+D    ++A   GAGI Y+ 
Sbjct: 184 HDLLNHQCVVFRYPSGKPFHWQFAKE---LEIAVAGNIILDDVDAELEAVLMGAGIGYLL 240

Query: 246 EELVRDDLRNGHLTELLAQWKAPPSRFFLYYPSRRHVPPALKALIEFIR 294
            E +++ L  G L  +L  W      F +YYP+R+++   L+A +++++
Sbjct: 241 YEQIKEYLDTGRLECVLEDWSTERPGFQIYYPNRQYMSCGLRAFLDYVK 289