Pairwise Alignments

Query, 260 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 299 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Azospirillum sp. SherDot2

 Score =  199 bits (505), Expect = 7e-56
 Identities = 120/263 (45%), Positives = 163/263 (61%), Gaps = 14/263 (5%)

Query: 9   LLELDHISLSFKGVKAVTDISFRVAAGEICALIGPNGAGKSSLLNVISGVYQAQDGHIRF 68
           LL ++H+++ F G+ A  D+SF   AGEI ALIGPNGAGK++L N ++G Y    G +  
Sbjct: 15  LLSVEHLTMRFGGLVANNDVSFEARAGEITALIGPNGAGKTTLFNCVTGFYTPTVGRLTL 74

Query: 69  DRQERR-----RMRPHDVA-VRGIARTFQNIALFKGMSVLDNVLTGRN--LKRRSTW-IE 119
                +     RM  + +A + G+ARTFQNI LF GMSVL+N++  ++  L R S + I 
Sbjct: 75  RHPAGKEFLLERMPGYRIAQLAGVARTFQNIRLFSGMSVLENLIVAQHNKLMRASGFAIA 134

Query: 120 QALRIGRARTEDDRQREAAERVIAFLHLQPWRDTLVGTLPYGLQKRVELARALAAEPRLL 179
             L +   R  +    E A+  +  + L  + D   G LPYG Q+R+E+ARA+  EP LL
Sbjct: 135 GLLGLPGFRKAEHEAVELAKYWLDRVRLTEFADWEAGNLPYGAQRRLEIARAMCTEPVLL 194

Query: 180 LLDEPMAGMNADEKQQMSR---FIVDINRELG--TTVVLIEHDIGVVMDISDHVVVLDYG 234
            LDEP AG+N  E  +++    FI D+    G  T V+LIEHD+ VVM ISDHVVVLDYG
Sbjct: 195 CLDEPAAGLNPRESGELAEILTFIRDVQTPQGHRTGVLLIEHDMSVVMRISDHVVVLDYG 254

Query: 235 RKIGDGSPEDVRQNPEVISAYLG 257
           RKI DG+PE V+ +P VI AYLG
Sbjct: 255 RKISDGTPEHVKNDPAVIRAYLG 277