Pairwise Alignments

Query, 367 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 364 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  342 bits (877), Expect = 9e-99
 Identities = 165/360 (45%), Positives = 250/360 (69%), Gaps = 2/360 (0%)

Query: 8   TLLGAVVSMLVSGASLAEERTVRIYNWIEYLPPEILKSFEEETGIRPIYDVFDSVETLES 67
           TLL   +   ++GA+ A+++ + +YNW +Y+ P+ + +FE+E+GI+ +YDVFDS ETLE+
Sbjct: 7   TLLALSLMGAMAGAAQADDKVLHVYNWSDYIAPDTIANFEKESGIKVVYDVFDSNETLEA 66

Query: 68  KLLTGNSGYDVVYPSSSNVSHLIAAGAVQPLDRSQLPNWQHLDPEFMKTLEAIGDEGNRY 127
           KLL G SGYD+V PS++ ++  I AG  Q LD+S+L N+ +L+   +K + ++ D  N++
Sbjct: 67  KLLAGKSGYDIVVPSNNFLAKQIKAGVYQELDKSKLSNYDNLNKSLLKAV-SVSDPDNKH 125

Query: 128 AAPYLWGTTLIGYNVDKVRQVLGADVQMNTWDIIFKEENMAKLASCGVGFLDAANEIVPI 187
           A PY+WG+  IGYN +KV+  LG D ++++WD++ K EN+AKL SCGV FLD+  E++P+
Sbjct: 126 AFPYMWGSIGIGYNPEKVKAALGVD-KIDSWDVLLKPENIAKLKSCGVSFLDSPTEMLPV 184

Query: 188 ALHYKGLDPNSQKREDYPQAQAAMHTVRPYITYFNSSRYGMDLANGEICVGVGWSGGVAL 247
           ALHY GL  ++QK+ D  QA+     +RP I YF+SS+Y  DLANG ICV VG+SG +  
Sbjct: 185 ALHYLGLPTDTQKKADLKQAEDLFLKIRPSIGYFHSSKYISDLANGNICVAVGYSGDIEQ 244

Query: 248 ATRLADAAGKGVKVAMALPKEGAPMWADVMMVPTNAPHTAEAYAFINYILRPDVIARISN 307
           A   A  AG  VKVA  +PKEGA  + D++ +P +A +   AY F+NY+L+P V+A I+N
Sbjct: 245 AKSRAAEAGGKVKVAYDIPKEGAGSFFDMVAIPKDAENVDAAYKFMNYLLKPQVMAEITN 304

Query: 308 KIGYPNPNKDATALVDAEIRSNPAMYIPDEARKTLFMLEPVPAAVERIRTRTWTAIKTNR 367
            + +PN N+ ATALVD EI S+P +Y P + +  L+ +  +PAA +R  TR+WT IK+ +
Sbjct: 305 SVHFPNGNEKATALVDKEITSDPGIYPPADVQAKLYAIADLPAATQREMTRSWTKIKSGK 364