Pairwise Alignments

Query, 367 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  359 bits (922), Expect = e-104
 Identities = 178/367 (48%), Positives = 253/367 (68%), Gaps = 5/367 (1%)

Query: 1   MSLFLRNTLLGAVVSMLVSGASLAEERTVRIYNWIEYLPPEILKSFEEETGIRPIYDVFD 60
           +SLF +  L+GA +++ +S   +    TV IYNW +Y+  + L +FE+ +GI+P+YDVFD
Sbjct: 3   ISLFRKAMLVGAGITLTLS---VQAAPTVHIYNWSDYIGTDTLANFEKASGIKPVYDVFD 59

Query: 61  SVETLESKLLTGNSGYDVVYPSSSNVSHLIAAGAVQPLDRSQLPNWQHLDPEFMKTLEAI 120
           S ETLE KLL G +GYDVV PS+  +   I AGA Q LD+S L N+ +LDP  +K LE  
Sbjct: 60  SNETLEGKLLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTNYANLDPALLKRLEK- 118

Query: 121 GDEGNRYAAPYLWGTTLIGYNVDKVRQVLGADVQMNTWDIIFKEENMAKLASCGVGFLDA 180
            D GN+YA PYLWGT  IGYN DK ++VLG D  +++W ++F+ ENM KLA+CGV F+D+
Sbjct: 119 NDPGNQYAVPYLWGTNGIGYNGDKGKEVLGVD-HIDSWAVLFEPENMKKLATCGVSFMDS 177

Query: 181 ANEIVPIALHYKGLDPNSQKREDYPQAQAAMHTVRPYITYFNSSRYGMDLANGEICVGVG 240
           A+E++P  L+Y GL+PNS   +DY +A+  +  VRPY+TYF+SS+Y  DLANG ICV  G
Sbjct: 178 ADEMLPAVLNYMGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKYISDLANGNICVAAG 237

Query: 241 WSGGVALATRLADAAGKGVKVAMALPKEGAPMWADVMMVPTNAPHTAEAYAFINYILRPD 300
           +SG V  A   A  AGKGV +A  +PKEG  +W DV+ +P +A +  EA+AFINY+L+P+
Sbjct: 238 FSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIPKDATNVKEAHAFINYLLQPE 297

Query: 301 VIARISNKIGYPNPNKDATALVDAEIRSNPAMYIPDEARKTLFMLEPVPAAVERIRTRTW 360
           VIA++S+ +GY NPN  A  L++  IR++ A+Y P       F+   +P  V+R+ TR+W
Sbjct: 298 VIAQVSDYVGYANPNPGADKLMEQSIRTDEAVYPPQAVLDRTFVNFELPPKVQRLMTRSW 357

Query: 361 TAIKTNR 367
           T +KT +
Sbjct: 358 TKVKTGK 364