Pairwise Alignments

Query, 367 a.a., Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) from Pseudomonas fluorescens FW300-N2E2

Subject, 370 a.a., putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  360 bits (924), Expect = e-104
 Identities = 177/365 (48%), Positives = 250/365 (68%), Gaps = 3/365 (0%)

Query: 4   FLRNTLLGAVVSMLVSGASLAEERTVRIYNWIEYLPPEILKSFEEETGIRPIYDVFDSVE 63
           +L   + GA++++ V G   AE++T+ IYNW +Y+ P+ + +FE+ETGI+ +YDVFDS E
Sbjct: 8   WLSGLVAGALMAVSV-GTLAAEQKTLHIYNWSDYIAPDTVANFEKETGIKVVYDVFDSNE 66

Query: 64  TLESKLLTGNSGYDVVYPSSSNVSHLIAAGAVQPLDRSQLPNWQHLDPEFMKTLEAIGDE 123
            LE KL+ G++G+D+V PS+S +   + AG  QPLD+S+LP W++LDPE +K L A  D 
Sbjct: 67  VLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLDKSKLPEWKNLDPELLK-LVAKHDP 125

Query: 124 GNRYAAPYLWGTTLIGYNVDKVRQVLGADVQMNTWDIIFKEENMAKLASCGVGFLDAANE 183
            N++A PY+W TT IGYNVDKV+ VLG +  +++WD+I K EN+ KL SCGV FLDA  E
Sbjct: 126 DNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSWDLILKPENLEKLKSCGVSFLDAPEE 185

Query: 184 IVPIALHYKGLDPNSQKREDYP-QAQAAMHTVRPYITYFNSSRYGMDLANGEICVGVGWS 242
           +    L+Y G DPNS K +DY   A   +  +RP I YF+SS+Y  DLANG+ICV +GW+
Sbjct: 186 VFATVLNYLGKDPNSTKADDYTGPATDLLLKLRPNIRYFHSSQYINDLANGDICVAIGWA 245

Query: 243 GGVALATRLADAAGKGVKVAMALPKEGAPMWADVMMVPTNAPHTAEAYAFINYILRPDVI 302
           G V  A+  A  A  GV V+ ++PKEGA  + DV  +P +A +  EAY F+NY+LRPDV+
Sbjct: 246 GDVWQASNRAKEAKNGVNVSFSIPKEGAMAFFDVFAMPADAKNKDEAYQFLNYLLRPDVV 305

Query: 303 ARISNKIGYPNPNKDATALVDAEIRSNPAMYIPDEARKTLFMLEPVPAAVERIRTRTWTA 362
           A IS+ + Y N NK AT LV AE+R NP +Y P + R  LF L+     ++R+RTR WT 
Sbjct: 306 AHISDHVFYANANKAATPLVSAEVRENPGIYPPADVRAKLFTLKVQDPKIDRVRTRAWTK 365

Query: 363 IKTNR 367
           +K+ +
Sbjct: 366 VKSGK 370