Pairwise Alignments

Query, 466 a.a., Gamma-aminobutyrate permease from Pseudomonas fluorescens FW300-N2E2

Subject, 466 a.a., gamma-aminobutyrate transporter (NCBI) from Escherichia coli BW25113

 Score =  524 bits (1349), Expect = e-153
 Identities = 261/433 (60%), Positives = 325/433 (75%), Gaps = 1/433 (0%)

Query: 13  LAQGFKPRHVTMLSIAGIIGAGLFVGSGHAIAAAGPAVMLAYLFSGLLVVLVMRMLGEMA 72
           L  G K RHVTMLSIAG+IGA LFVGS  AIA AGPAV+LAYLF+GLLVV++MRML EMA
Sbjct: 10  LGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMA 69

Query: 73  VANPDTGSFSTYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHVLNQWFPAIDAWLF 132
           VA PDTGSFSTYAD+AIGRWAG+TIGWLYWWFWVLVIP+EA  A  +L+ W P I  WLF
Sbjct: 70  VATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMILHSWVPGIPIWLF 129

Query: 133 ASVSIVLLAVTNLFSVSKYGEFEFWFAMAKVVAIIGFISLGFAVLMGWIPEREASGLSRL 192
           + V  + L  +NL SV  YGEFEFW A+ KV+AI+ FI LG   + G+ P  E SG+SRL
Sbjct: 130 SLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGFYPYAEVSGISRL 189

Query: 193 MEEHGGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESDNPAQNIAKATRSVIWRIGVF 252
            +  GGF PNG  AV+ A +  MFSF+G E VTIAAAESD P ++I +AT SVIWRI +F
Sbjct: 190 WDS-GGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIF 248

Query: 253 YLLSIFVVISVVPWNDPLLASVGSYQRALELMNIPHAKFLVDMVVLIAVASCMNSSIYIA 312
           YL SIFVV++++PWN P L +VGSY+  LEL+NIPHAK ++D V+L++V SC+NS++Y A
Sbjct: 249 YLCSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTA 308

Query: 313 SRMLYSLGRRGDAPKALKVTSSAGVPRSAVIASTVLGAGVTLFSYFMPAGLFQFLLASSG 372
           SRMLYSL RRGDAP  +   + +  P  AV+ ST       + +Y+ PA +F+FL+ SSG
Sbjct: 309 SRMLYSLSRRGDAPAVMGKINRSKTPYVAVLLSTGAAFLTVVVNYYAPAKVFKFLIDSSG 368

Query: 373 AIALLVYLVIAISQLRMRRMLQRQNIELPFRMWLFPWLTWLVIVFISAALAVMMVTPEHR 432
           AIALLVYLVIA+SQLRMR++L+ +  E+  RMWL+PWLTWLVI FI+  L VM+  P  +
Sbjct: 369 AIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQ 428

Query: 433 SEVSTTLGLALVI 445
            EV +T  LA+ I
Sbjct: 429 LEVISTGLLAIGI 441